U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LOC718576 caspase recruitment domain-containing protein 8 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718576, updated on 14-Nov-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC718576
    Gene description
    caspase recruitment domain-containing protein 8
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC718576 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (48174463..48213538, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (43539392..43577018, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene DNA ligase 1 Neighboring gene zinc finger SWIM-type containing 9 Neighboring gene caspase recruitment domain-containing protein 8 Neighboring gene vomeronasal 1 receptor macMulV1R-ps1040 pseudogene Neighboring gene zinc finger protein 114 Neighboring gene outer dynein arm docking complex subunit 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type endopeptidase activator activity involved in apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of canonical NF-kappaB signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of NLRP3 inflammasome complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    caspase recruitment domain-containing protein 8

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      48174463..48213538 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015124453.2 → XP_014979939.2  caspase recruitment domain-containing protein 8 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZNU3
      Conserved Domains (1) summary
      pfam13553
      Location:90 → 343
      FIIND; Function to find

    2. XM_015124454.2 → XP_014979940.2  caspase recruitment domain-containing protein 8 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZNU3
      Conserved Domains (1) summary
      pfam13553
      Location:90 → 343
      FIIND; Function to find

    3. XM_028838583.1 → XP_028694416.1  caspase recruitment domain-containing protein 8 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZNU3
      Conserved Domains (1) summary
      pfam13553
      Location:90 → 343
      FIIND; Function to find

    4. XM_028838584.1 → XP_028694417.1  caspase recruitment domain-containing protein 8 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZNU3
      Conserved Domains (1) summary
      pfam13553
      Location:90 → 343
      FIIND; Function to find

    5. XM_028838586.1 → XP_028694419.1  caspase recruitment domain-containing protein 8 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZNU3
      Conserved Domains (1) summary
      pfam13553
      Location:65 → 318
      FIIND; Function to find

    6. XM_028838585.1 → XP_028694418.1  caspase recruitment domain-containing protein 8 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZNU3
      Conserved Domains (1) summary
      pfam13553
      Location:72 → 325
      FIIND; Function to find

    7. XM_028838589.1 → XP_028694422.1  caspase recruitment domain-containing protein 8 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZNU3
      Conserved Domains (1) summary
      pfam13553
      Location:65 → 318
      FIIND; Function to find

    8. XM_028838587.1 → XP_028694420.1  caspase recruitment domain-containing protein 8 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZNU3
      Conserved Domains (1) summary
      pfam13553
      Location:65 → 318
      FIIND; Function to find

    9. XM_028838588.1 → XP_028694421.1  caspase recruitment domain-containing protein 8 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZNU3
      Conserved Domains (1) summary
      pfam13553
      Location:65 → 318
      FIIND; Function to find

    10. XM_002801323.3 → XP_002801369.3  caspase recruitment domain-containing protein 8 isoform X4

      UniProtKB/TrEMBL
      A0A5F8A9I1
      Conserved Domains (2) summary
      pfam13553
      Location:90 → 343
      FIIND; Function to find
      pfam00619
      Location:360 → 442
      CARD; Caspase recruitment domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials