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    VPS9D1 VPS9 domain containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700355, updated on 17-Aug-2024

    Summary

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    Official Symbol
    VPS9D1provided by VGNC
    Official Full Name
    VPS9 domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:99629
    See related
    Ensembl:ENSMMUG00000002505
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See VPS9D1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (76744483..76757586, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (74570309..74583431, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene cyclin dependent kinase 10 Neighboring gene uncharacterized LOC106995127 Neighboring gene spermatogenesis associated 2 like Neighboring gene uncharacterized LOC114674440 Neighboring gene zinc finger protein 276 Neighboring gene FA complementation group A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    VPS9 domain-containing protein 1
    Names
    uncharacterized protein C16orf7 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      76744483..76757586 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015126825.2 → XP_014982311.2  VPS9 domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      F7HEM2, I0FKK8, I2CYY7
      Related
      ENSMMUP00000003369.4, ENSMMUT00000003565.4
      Conserved Domains (1) summary
      pfam02204
      Location:509 → 624
      VPS9; Vacuolar sorting protein 9 (VPS9) domain

    2. XM_028841268.1 → XP_028697101.1  VPS9 domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      I0FKK8
      Conserved Domains (1) summary
      pfam02204
      Location:510 → 625
      VPS9; Vacuolar sorting protein 9 (VPS9) domain

    3. XM_028841270.1 → XP_028697103.1  VPS9 domain-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5QB21
      Conserved Domains (1) summary
      pfam02204
      Location:440 → 555
      VPS9; Vacuolar sorting protein 9 (VPS9) domain

    4. XM_028841269.1 → XP_028697102.1  VPS9 domain-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5QB21
      Conserved Domains (1) summary
      pfam02204
      Location:440 → 555
      VPS9; Vacuolar sorting protein 9 (VPS9) domain

    5. XM_028841271.1 → XP_028697104.1  VPS9 domain-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5QB21
      Conserved Domains (1) summary
      pfam02204
      Location:440 → 555
      VPS9; Vacuolar sorting protein 9 (VPS9) domain

    6. XM_028841272.1 → XP_028697105.1  VPS9 domain-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5QB21
      Conserved Domains (1) summary
      pfam02204
      Location:440 → 555
      VPS9; Vacuolar sorting protein 9 (VPS9) domain
    Nucleotide Protein
    Heading Accession and Version

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