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    LRRFIP2 LRR binding FLII interacting protein 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698661, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LRRFIP2provided by VGNC
    Official Full Name
    LRR binding FLII interacting protein 2provided by VGNC
    Primary source
    VGNC:VGNC:74449
    Locus tag
    EGK_11804
    See related
    Ensembl:ENSMMUG00000022539
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LRRFIP2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    33
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (92471260..92600055, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (105629964..105757513)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene EPM2A interacting protein 1 Neighboring gene uncharacterized LOC114676315 Neighboring gene mutL homolog 1 Neighboring gene U6 spliceosomal RNA Neighboring gene NEDD8-conjugating enzyme UBE2F pseudogene Neighboring gene ubiquitin-conjugating enzyme E2 D3 pseudogene Neighboring gene uncharacterized LOC114676317 Neighboring gene 40S ribosomal protein S16 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC114676139

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat flightless-interacting protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      92471260..92600055 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028843947.1 → XP_028699780.1  leucine-rich repeat flightless-interacting protein 2 isoform X24

      UniProtKB/TrEMBL
      A0A5F8ALK6
      Conserved Domains (2) summary
      pfam04111
      Location:339 → 434
      APG6; Autophagy protein Apg6
      pfam09738
      Location:47 → 359
      LRRFIP; LRRFIP family

    2. XM_028843944.1 → XP_028699777.1  leucine-rich repeat flightless-interacting protein 2 isoform X22

      UniProtKB/TrEMBL
      A0A5F8ALK6
      Conserved Domains (2) summary
      pfam04111
      Location:370 → 465
      APG6; Autophagy protein Apg6
      pfam09738
      Location:47 → 390
      LRRFIP; LRRFIP family

    3. XM_028843945.1 → XP_028699778.1  leucine-rich repeat flightless-interacting protein 2 isoform X23

      UniProtKB/TrEMBL
      A0A1D5R5D4, A0A5F8ALK6
      Related
      ENSMMUP00000055521.2, ENSMMUT00000073430.2
      Conserved Domains (2) summary
      pfam04111
      Location:363 → 458
      APG6; Autophagy protein Apg6
      pfam09738
      Location:47 → 383
      LRRFIP; LRRFIP family

    4. XM_028843941.1 → XP_028699774.1  leucine-rich repeat flightless-interacting protein 2 isoform X20

      UniProtKB/TrEMBL
      A0A5F8ALK6
      Conserved Domains (2) summary
      pfam04111
      Location:394 → 489
      APG6; Autophagy protein Apg6
      pfam09738
      Location:47 → 414
      LRRFIP; LRRFIP family

    5. XM_028843939.1 → XP_028699772.1  leucine-rich repeat flightless-interacting protein 2 isoform X19

      UniProtKB/TrEMBL
      A0A5F8ALK6
      Conserved Domains (2) summary
      pfam04111
      Location:397 → 492
      APG6; Autophagy protein Apg6
      pfam09738
      Location:47 → 417
      LRRFIP; LRRFIP family

    6. XM_015131394.2 → XP_014986880.1  leucine-rich repeat flightless-interacting protein 2 isoform X26

      UniProtKB/TrEMBL
      A0A1D5RDZ9, H9EUI0
      Related
      ENSMMUP00000042906.2, ENSMMUT00000056055.2
      Conserved Domains (1) summary
      pfam09738
      Location:47 → 325
      DUF2051; Double stranded RNA binding protein (DUF2051)

    7. XM_015131393.2 → XP_014986879.1  leucine-rich repeat flightless-interacting protein 2 isoform X25

      UniProtKB/TrEMBL
      F6Y9Y9, H9EPE5
      Related
      ENSMMUP00000029676.4, ENSMMUT00000031720.4
      Conserved Domains (1) summary
      pfam09738
      Location:47 → 349
      DUF2051; Double stranded RNA binding protein (DUF2051)

    8. XM_015131376.2 → XP_014986862.1  leucine-rich repeat flightless-interacting protein 2 isoform X1

      Conserved Domains (3) summary
      pfam04156
      Location:422 → 545
      IncA; IncA protein
      pfam04111
      Location:649 → 744
      APG6; Autophagy protein Apg6
      pfam09738
      Location:315 → 669
      LRRFIP; LRRFIP family

    9. XM_028843946.1 → XP_028699779.1  leucine-rich repeat flightless-interacting protein 2 isoform X23

      UniProtKB/TrEMBL
      A0A1D5R5D4, A0A5F8ALK6
      Conserved Domains (2) summary
      pfam04111
      Location:363 → 458
      APG6; Autophagy protein Apg6
      pfam09738
      Location:47 → 383
      LRRFIP; LRRFIP family

    10. XM_028843942.1 → XP_028699775.1  leucine-rich repeat flightless-interacting protein 2 isoform X20

      UniProtKB/TrEMBL
      A0A5F8ALK6
      Conserved Domains (2) summary
      pfam04111
      Location:394 → 489
      APG6; Autophagy protein Apg6
      pfam09738
      Location:47 → 414
      LRRFIP; LRRFIP family

    11. XM_028843930.1 → XP_028699763.1  leucine-rich repeat flightless-interacting protein 2 isoform X1

      Conserved Domains (3) summary
      pfam04156
      Location:422 → 545
      IncA; IncA protein
      pfam04111
      Location:649 → 744
      APG6; Autophagy protein Apg6
      pfam09738
      Location:315 → 669
      LRRFIP; LRRFIP family

    12. XM_028843932.1 → XP_028699765.1  leucine-rich repeat flightless-interacting protein 2 isoform X1

      Conserved Domains (3) summary
      pfam04156
      Location:422 → 545
      IncA; IncA protein
      pfam04111
      Location:649 → 744
      APG6; Autophagy protein Apg6
      pfam09738
      Location:315 → 669
      LRRFIP; LRRFIP family

    13. XM_015131388.2 → XP_014986874.1  leucine-rich repeat flightless-interacting protein 2 isoform X12

      Conserved Domains (2) summary
      pfam09738
      Location:279 → 633
      DUF2051; Double stranded RNA binding protein (DUF2051)
      pfam13870
      Location:409 → 506
      DUF4201; Domain of unknown function (DUF4201)

    14. XM_028843943.1 → XP_028699776.1  leucine-rich repeat flightless-interacting protein 2 isoform X21

      UniProtKB/TrEMBL
      A0A5F8ALK6
      Conserved Domains (2) summary
      pfam04111
      Location:373 → 468
      APG6; Autophagy protein Apg6
      pfam09738
      Location:47 → 393
      LRRFIP; LRRFIP family

    15. XM_015131391.2 → XP_014986877.1  leucine-rich repeat flightless-interacting protein 2 isoform X18

      UniProtKB/TrEMBL
      A0A5F8ALK6
      Conserved Domains (1) summary
      pfam09738
      Location:47 → 424
      DUF2051; Double stranded RNA binding protein (DUF2051)

    16. XM_028843948.1 → XP_028699781.1  leucine-rich repeat flightless-interacting protein 2 isoform X27

      Conserved Domains (2) summary
      pfam04111
      Location:562 → 657
      APG6; Autophagy protein Apg6
      pfam09738
      Location:283 → 582
      LRRFIP; LRRFIP family

    17. XM_028843949.1 → XP_028699782.1  leucine-rich repeat flightless-interacting protein 2 isoform X28

      Conserved Domains (2) summary
      pfam04111
      Location:571 → 666
      APG6; Autophagy protein Apg6
      pfam09738
      Location:261 → 591
      LRRFIP; LRRFIP family

    18. XM_028843933.1 → XP_028699766.1  leucine-rich repeat flightless-interacting protein 2 isoform X5

      Conserved Domains (3) summary
      pfam04156
      Location:405 → 528
      IncA; IncA protein
      pfam04111
      Location:632 → 727
      APG6; Autophagy protein Apg6
      pfam09738
      Location:298 → 652
      LRRFIP; LRRFIP family

    19. XM_015131387.2 → XP_014986873.1  leucine-rich repeat flightless-interacting protein 2 isoform X11

      Conserved Domains (2) summary
      pfam09738
      Location:281 → 635
      DUF2051; Double stranded RNA binding protein (DUF2051)
      pfam13870
      Location:411 → 508
      DUF4201; Domain of unknown function (DUF4201)

    20. XM_028843934.1 → XP_028699767.1  leucine-rich repeat flightless-interacting protein 2 isoform X6

      Conserved Domains (3) summary
      pfam04156
      Location:403 → 526
      IncA; IncA protein
      pfam04111
      Location:630 → 725
      APG6; Autophagy protein Apg6
      pfam09738
      Location:296 → 650
      LRRFIP; LRRFIP family

    21. XM_015131383.2 → XP_014986869.1  leucine-rich repeat flightless-interacting protein 2 isoform X7

      UniProtKB/TrEMBL
      A0A663D9A4, A0A8J8XWJ0, F6YA06, G7MJ23
      Related
      ENSMMUP00000029674.4, ENSMMUT00000031718.4
      Conserved Domains (2) summary
      pfam09738
      Location:292 → 646
      DUF2051; Double stranded RNA binding protein (DUF2051)
      pfam13870
      Location:422 → 519
      DUF4201; Domain of unknown function (DUF4201)

    22. XM_015131390.2 → XP_014986876.1  leucine-rich repeat flightless-interacting protein 2 isoform X17

      Conserved Domains (1) summary
      pfam09738
      Location:195 → 549
      DUF2051; Double stranded RNA binding protein (DUF2051)

    23. XM_015131382.2 → XP_014986868.1  leucine-rich repeat flightless-interacting protein 2 isoform X4

      Conserved Domains (2) summary
      pfam04156
      Location:414 → 529
      IncA; IncA protein
      pfam09738
      Location:299 → 653
      DUF2051; Double stranded RNA binding protein (DUF2051)

    24. XM_015131379.2 → XP_014986865.1  leucine-rich repeat flightless-interacting protein 2 isoform X2

      UniProtKB/TrEMBL
      F6YA06
      Conserved Domains (2) summary
      pfam09738
      Location:314 → 668
      DUF2051; Double stranded RNA binding protein (DUF2051)
      pfam13870
      Location:444 → 541
      DUF4201; Domain of unknown function (DUF4201)

    25. XM_028843938.1 → XP_028699771.1  leucine-rich repeat flightless-interacting protein 2 isoform X16

      Conserved Domains (2) summary
      pfam04111
      Location:579 → 674
      APG6; Autophagy protein Apg6
      pfam09738
      Location:300 → 599
      LRRFIP; LRRFIP family

    26. XM_015131380.2 → XP_014986866.1  leucine-rich repeat flightless-interacting protein 2 isoform X3

      Conserved Domains (2) summary
      pfam04156
      Location:415 → 530
      IncA; IncA protein
      pfam09738
      Location:300 → 654
      DUF2051; Double stranded RNA binding protein (DUF2051)

    27. XM_028843937.1 → XP_028699770.1  leucine-rich repeat flightless-interacting protein 2 isoform X14

      Conserved Domains (2) summary
      pfam04111
      Location:588 → 683
      APG6; Autophagy protein Apg6
      pfam09738
      Location:278 → 608
      LRRFIP; LRRFIP family

    28. XM_015131385.2 → XP_014986871.1  leucine-rich repeat flightless-interacting protein 2 isoform X9

      Conserved Domains (1) summary
      pfam09738
      Location:278 → 639
      DUF2051; Double stranded RNA binding protein (DUF2051)

    29. XM_028843936.1 → XP_028699769.1  leucine-rich repeat flightless-interacting protein 2 isoform X13

      Conserved Domains (2) summary
      pfam04111
      Location:594 → 689
      APG6; Autophagy protein Apg6
      pfam09738
      Location:315 → 614
      LRRFIP; LRRFIP family

    30. XM_015131384.2 → XP_014986870.1  leucine-rich repeat flightless-interacting protein 2 isoform X8

      Conserved Domains (2) summary
      pfam09738
      Location:315 → 645
      DUF2051; Double stranded RNA binding protein (DUF2051)
      pfam13870
      Location:421 → 518
      DUF4201; Domain of unknown function (DUF4201)

    31. XM_015131389.2 → XP_014986875.1  leucine-rich repeat flightless-interacting protein 2 isoform X15

      Conserved Domains (3) summary
      pfam09738
      Location:315 → 604
      DUF2051; Double stranded RNA binding protein (DUF2051)
      pfam16043
      Location:501 → 656
      DUF4795; Domain of unknown function (DUF4795)
      pfam17031
      Location:371 → 427
      DUF5101; Domain of unknown function (DUF5101)

    32. XM_015131386.2 → XP_014986872.1  leucine-rich repeat flightless-interacting protein 2 isoform X10

      Conserved Domains (3) summary
      pfam09738
      Location:315 → 638
      DUF2051; Double stranded RNA binding protein (DUF2051)
      cd16269
      Location:485 → 498
      GBP_C; coiled coil [structural motif]
      cl20817
      Location:365 → 505
      GBP_C; Guanylate-binding protein, C-terminal domain

    33. XM_015131375.2 → XP_014986861.1  leucine-rich repeat flightless-interacting protein 2 isoform X1

      Conserved Domains (3) summary
      pfam04156
      Location:422 → 545
      IncA; IncA protein
      pfam04111
      Location:649 → 744
      APG6; Autophagy protein Apg6
      pfam09738
      Location:315 → 669
      LRRFIP; LRRFIP family

    34. XM_015131377.2 → XP_014986863.1  leucine-rich repeat flightless-interacting protein 2 isoform X1

      Conserved Domains (3) summary
      pfam04156
      Location:422 → 545
      IncA; IncA protein
      pfam04111
      Location:649 → 744
      APG6; Autophagy protein Apg6
      pfam09738
      Location:315 → 669
      LRRFIP; LRRFIP family
    Nucleotide Protein
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