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    FAAP20 FA core complex associated protein 20 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697506, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FAAP20provided by VGNC
    Official Full Name
    FA core complex associated protein 20provided by VGNC
    Primary source
    VGNC:VGNC:99935
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See FAAP20 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (222218089..222227565)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (1224423..1245941, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene SKI proto-oncogene Neighboring gene uncharacterized LOC100430539 Neighboring gene uncharacterized LOC697268 Neighboring gene protein kinase C zeta Neighboring gene uncharacterized LOC114674424 Neighboring gene uncharacterized LOC114678356

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables K63-linked polyubiquitin modification-dependent protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA damage response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Fanconi anemia core complex-associated protein 20
    Names
    Fanconi anemia core complex associated protein 20

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      222218089..222227565
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028841105.1 → XP_028696938.1  Fanconi anemia core complex-associated protein 20 isoform X1

      Conserved Domains (2) summary
      pfam15750
      Location:143 → 177
      UBZ_FAAP20; Ubiquitin-binding zinc-finger
      pfam15751
      Location:35 → 139
      FANCA_interact; FAAP20 FANCA interaction domain

    2. XM_028841110.1 → XP_028696943.1  Fanconi anemia core complex-associated protein 20 isoform X2

      Conserved Domains (2) summary
      pfam15750
      Location:143 → 177
      UBZ_FAAP20; Ubiquitin-binding zinc-finger
      pfam15751
      Location:35 → 139
      FANCA_interact; FAAP20 FANCA interaction domain

    3. XM_015135276.2 → XP_014990762.2  Fanconi anemia core complex-associated protein 20 isoform X1

      Conserved Domains (2) summary
      pfam15750
      Location:143 → 177
      UBZ_FAAP20; Ubiquitin-binding zinc-finger
      pfam15751
      Location:35 → 139
      FANCA_interact; FAAP20 FANCA interaction domain
    Nucleotide Protein
    Heading Accession and Version

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