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    SSR4 signal sequence receptor subunit 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697266, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SSR4provided by VGNC
    Official Full Name
    signal sequence receptor subunit 4provided by VGNC
    Primary source
    VGNC:VGNC:77890
    See related
    Ensembl:ENSMMUG00000003375
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SSR4 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (149777806..149782006)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (147266872..147271051)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene plexin B3 Neighboring gene SRSF protein kinase 3 Neighboring gene isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma Neighboring gene PDZ domain containing 4 Neighboring gene L1 cell adhesion molecule Neighboring gene putative lung carcinoma-associated protein 10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    translocon-associated protein subunit delta
    Names
    signal sequence receptor, delta (translocon-associated protein delta)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      149777806..149782006
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028842312.1 → XP_028698145.1  translocon-associated protein subunit delta isoform X2

      Conserved Domains (1) summary
      pfam05404
      Location:48 → 166
      TRAP-delta; Translocon-associated protein, delta subunit precursor (TRAP-delta)

    2. XM_015128523.2 → XP_014984009.2  translocon-associated protein subunit delta isoform X1

      UniProtKB/TrEMBL
      A0A5S6RAF9, A0A8J8XM99, F7E8B0, G7NSK0, H9F7V4
      Conserved Domains (1) summary
      pfam05404
      Location:21 → 172
      TRAP-delta; Translocon-associated protein, delta subunit precursor (TRAP-delta)

    3. XM_028842313.1 → XP_028698146.1  translocon-associated protein subunit delta isoform X1

      UniProtKB/TrEMBL
      A0A5S6RAF9, A0A8J8XM99, F7E8B0, G7NSK0, H9F7V4
      Related
      ENSMMUP00000004497.4, ENSMMUT00000004771.4
      Conserved Domains (1) summary
      pfam05404
      Location:21 → 172
      TRAP-delta; Translocon-associated protein, delta subunit precursor (TRAP-delta)
    Nucleotide Protein
    Heading Accession and Version

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