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    MRPL39 mitochondrial ribosomal protein L39 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708631, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MRPL39provided by VGNC
    Official Full Name
    mitochondrial ribosomal protein L39provided by VGNC
    Primary source
    VGNC:VGNC:74737
    See related
    Ensembl:ENSMMUG00000017605
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See MRPL39 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (21060790..21299524)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (21381394..21620632)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene GA binding protein transcription factor subunit alpha Neighboring gene ATP synthase peripheral stalk subunit F6 Neighboring gene junctional adhesion molecule 2 Neighboring gene MIR155 host gene Neighboring gene microRNA mir-155 Neighboring gene small nucleolar RNA U13 Neighboring gene putative uncharacterized protein encoded by LINC00158 Neighboring gene uncharacterized LOC114676833 Neighboring gene uncharacterized LOC114676835 Neighboring gene uncharacterized LOC114676834 Neighboring gene 60S ribosomal protein L12 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    39S ribosomal protein L39, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      21060790..21299524
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028845396.1 → XP_028701229.1  39S ribosomal protein L39, mitochondrial isoform X8

      UniProtKB/TrEMBL
      F6WC16
      Conserved Domains (1) summary
      PLN02908
      Location:30 → 329
      PLN02908; threonyl-tRNA synthetase

    2. XM_015133078.2 → XP_014988564.1  39S ribosomal protein L39, mitochondrial isoform X3

      UniProtKB/TrEMBL
      H9FEQ3
      Related
      ENSMMUP00000079576.1, ENSMMUT00000084637.1
      Conserved Domains (1) summary
      PLN02908
      Location:30 → 303
      PLN02908; threonyl-tRNA synthetase

    3. XM_015133076.2 → XP_014988562.1  39S ribosomal protein L39, mitochondrial isoform X3

      UniProtKB/TrEMBL
      H9FEQ3
      Conserved Domains (1) summary
      PLN02908
      Location:30 → 303
      PLN02908; threonyl-tRNA synthetase

    4. XM_015133075.2 → XP_014988561.1  39S ribosomal protein L39, mitochondrial isoform X3

      UniProtKB/TrEMBL
      H9FEQ3
      Related
      ENSMMUP00000072951.1, ENSMMUT00000088168.1
      Conserved Domains (1) summary
      PLN02908
      Location:30 → 303
      PLN02908; threonyl-tRNA synthetase

    5. XM_028845393.1 → XP_028701226.1  39S ribosomal protein L39, mitochondrial isoform X1

      UniProtKB/TrEMBL
      F6WC16
      Conserved Domains (1) summary
      PLN02908
      Location:30 → 303
      PLN02908; threonyl-tRNA synthetase

    6. XM_028845395.1 → XP_028701228.1  39S ribosomal protein L39, mitochondrial isoform X7

      UniProtKB/TrEMBL
      H9FEQ3
      Conserved Domains (1) summary
      PLN02908
      Location:30 → 303
      PLN02908; threonyl-tRNA synthetase

    7. XM_015133074.2 → XP_014988560.2  39S ribosomal protein L39, mitochondrial isoform X2

      UniProtKB/TrEMBL
      F6WC16
      Conserved Domains (1) summary
      PLN02908
      Location:30 → 303
      PLN02908; threonyl-tRNA synthetase

    8. XM_001105710.4 → XP_001105710.1  39S ribosomal protein L39, mitochondrial isoform X5

      See identical proteins and their annotated locations for XP_001105710.1

      UniProtKB/TrEMBL
      A0A1D5QSM8, H9FEQ3
      Related
      ENSMMUP00000051056.2, ENSMMUT00000062003.2
      Conserved Domains (1) summary
      cd01667
      Location:76 → 130
      TGS_ThrRS_N; TGS _ThrRS_N: ThrRS (threonyl-tRNA Synthetase) is a class II tRNA synthetase that couples threonine to its cognate tRNA. In addition to its catalytic and anticodon-binding domains, ThrRS has an N-terminal TGS domain, named after the ThrRS, GTPase, and ...

    9. XM_028845394.1 → XP_028701227.1  39S ribosomal protein L39, mitochondrial isoform X6

      UniProtKB/TrEMBL
      F6WBD3, F6WC16
      Related
      ENSMMUP00000023170.3, ENSMMUT00000024757.4
      Conserved Domains (1) summary
      PLN02908
      Location:30 → 303
      PLN02908; threonyl-tRNA synthetase

    10. XM_015133080.2 → XP_014988566.1  39S ribosomal protein L39, mitochondrial isoform X4

      UniProtKB/TrEMBL
      A0A5F7ZQ45, G7MNB4
      Related
      ENSMMUP00000067272.1, ENSMMUT00000105703.1
      Conserved Domains (1) summary
      PLN02908
      Location:30 → 303
      PLN02908; threonyl-tRNA synthetase

    RNA

    1. XR_003727915.1 RNA Sequence

      Related
      ENSMMUT00000096280.1
    Nucleotide Protein
    Heading Accession and Version

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