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    GBP6 guanylate binding protein family member 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695271, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GBP6provided by VGNC
    Official Full Name
    guanylate binding protein family member 6provided by VGNC
    Primary source
    VGNC:VGNC:104705
    See related
    Ensembl:ENSMMUG00000020157
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human all
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    Genomic context

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    See GBP6 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (135089659..135112201, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (89570580..89586730)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene guanylate-binding protein 1 Neighboring gene calpain small subunit 1 pseudogene Neighboring gene guanylate-binding protein 6-like Neighboring gene calpain small subunit 1 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in defense response to Gram-positive bacterium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in defense response to protozoan IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    guanylate-binding protein 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      135089659..135112201 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028831592.1 → XP_028687425.1  guanylate-binding protein 6 isoform X2

      Conserved Domains (2) summary
      pfam02841
      Location:153 → 449
      GBP_C; Guanylate-binding protein, C-terminal domain
      cl21455
      Location:1 → 151
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    2. XM_015144556.2 → XP_015000042.2  guanylate-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      F6RNS5, F6TR70
      Related
      ENSMMUP00000026542.4, ENSMMUT00000028362.4
      Conserved Domains (2) summary
      pfam02263
      Location:18 → 281
      GBP; Guanylate-binding protein, N-terminal domain
      pfam02841
      Location:283 → 579
      GBP_C; Guanylate-binding protein, C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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