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    MINDY3 MINDY lysine 48 deubiquitinase 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699009, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MINDY3provided by VGNC
    Official Full Name
    MINDY lysine 48 deubiquitinase 3provided by VGNC
    Primary source
    VGNC:VGNC:74811
    Locus tag
    EGK_19483
    See related
    Ensembl:ENSMMUG00000023766
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    FAM188A; C9H10orf97
    Orthologs
    human mouse all
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    Genomic context

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    See MINDY3 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (16922807..17004002, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (15886435..15967575, complement)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114670107 Neighboring gene integrin subunit alpha 8 Neighboring gene small nucleolar RNA U13 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables K48-linked deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein K48-linked deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin carboxyl-terminal hydrolase MINDY-3
    Names
    Dermal papilla-derived protein 5
    caspase recruitment domain containing pro-apoptotic protein
    family with sequence similarity 188 member A
    protein FAM188A
    NP_001180791.1
    XP_015001961.1
    XP_015001962.1
    XP_015001963.1
    XP_028709164.1
    XP_028709165.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193862.1 → NP_001180791.1  ubiquitin carboxyl-terminal hydrolase MINDY-3

      See identical proteins and their annotated locations for NP_001180791.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000483
      UniProtKB/TrEMBL
      A0A8J8XAR7, F7GVK3, G7N1N2
      Related
      ENSMMUP00000031307.2, ENSMMUT00000033450.4
      Conserved Domains (1) summary
      pfam13898
      Location:29 → 315
      DUF4205; Domain of unknown function (DUF4205)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      16922807..17004002 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015146475.2 → XP_015001961.1  ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X1

      Conserved Domains (1) summary
      pfam13898
      Location:29 → 315
      DUF4205; Domain of unknown function (DUF4205)

    2. XM_015146476.2 → XP_015001962.1  ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZVR7
      Related
      ENSMMUP00000069749.1, ENSMMUT00000102644.1
      Conserved Domains (1) summary
      pfam13898
      Location:29 → 267
      DUF4205; Domain of unknown function (DUF4205)

    3. XM_028853332.1 → XP_028709165.1  ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X5

      Conserved Domains (1) summary
      pfam13898
      Location:6 → 142
      DUF4205; Domain of unknown function (DUF4205)

    4. XM_028853331.1 → XP_028709164.1  ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X4

      Conserved Domains (1) summary
      pfam13898
      Location:32 → 168
      DUF4205; Domain of unknown function (DUF4205)

    5. XM_015146477.2 → XP_015001963.1  ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X3

      Conserved Domains (1) summary
      pfam13898
      Location:29 → 315
      DUF4205; Domain of unknown function (DUF4205)

    RNA

    1. XR_003732775.1 RNA Sequence

    2. XR_001446988.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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