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    RAVER2 ribonucleoprotein, PTB binding 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701724, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RAVER2provided by VGNC
    Official Full Name
    ribonucleoprotein, PTB binding 2provided by VGNC
    Primary source
    VGNC:VGNC:76536
    See related
    Ensembl:ENSMMUG00000018565
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RAVER2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (159600371..159686650, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (64429547..64515941)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene Janus kinase 1 Neighboring gene solute carrier family 2, facilitated glucose transporter member 3 pseudogene Neighboring gene cytochrome c oxidase subunit NDUFA4 pseudogene Neighboring gene 40S ribosomal protein S26-like Neighboring gene cache domain containing 1 Neighboring gene U7 small nuclear RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribonucleoprotein PTB-binding 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      159600371..159686650 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015141708.2 → XP_014997194.2  ribonucleoprotein PTB-binding 2 isoform X1

      UniProtKB/TrEMBL
      F6YLZ0
      Conserved Domains (3) summary
      cd12664
      Location:72 → 141
      RRM1_RAVER2; RNA recognition motif 1 in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12666
      Location:145 → 221
      RRM2_RAVER2; RNA recognition motif 2 in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12668
      Location:231 → 328
      RRM3_RAVER2; RNA recognition motif 3 found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)

    2. XM_015141714.2 → XP_014997200.2  ribonucleoprotein PTB-binding 2 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QPS9, F6YLZ0
      Related
      ENSMMUP00000050056.2, ENSMMUT00000067160.2
      Conserved Domains (3) summary
      cd12664
      Location:72 → 141
      RRM1_RAVER2; RNA recognition motif 1 in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12666
      Location:145 → 221
      RRM2_RAVER2; RNA recognition motif 2 in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12668
      Location:231 → 328
      RRM3_RAVER2; RNA recognition motif 3 found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)

    3. XM_015141715.2 → XP_014997201.2  ribonucleoprotein PTB-binding 2 isoform X3

      UniProtKB/TrEMBL
      G7MHH6
      Conserved Domains (3) summary
      cd12666
      Location:51 → 127
      RRM2_RAVER2; RNA recognition motif 2 in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cd12668
      Location:137 → 234
      RRM3_RAVER2; RNA recognition motif 3 found in vertebrate ribonucleoprotein PTB-binding 2 (raver-2)
      cl17169
      Location:14 → 47
      RRM_SF; RNA recognition motif (RRM) superfamily

    RNA

    1. XR_001445773.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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