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    IKZF1 IKAROS family zinc finger 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693936, updated on 17-Aug-2024

    Summary

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    Official Symbol
    IKZF1provided by VGNC
    Official Full Name
    IKAROS family zinc finger 1provided by VGNC
    Primary source
    VGNC:VGNC:73585
    See related
    Ensembl:ENSMMUG00000000504
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    ZNFN1A1
    Orthologs
    human mouse all
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    Genomic context

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    See IKZF1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (64871690..64973685, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (58276798..58326594, complement)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene fidgetin like 1 Neighboring gene sperm microtubule inner protein 7 Neighboring gene zona pellucida binding protein Neighboring gene nucleolar GTP-binding protein 2 pseudogene Neighboring gene von Willebrand factor C domain containing 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-binding protein Ikaros
    Names
    zinc finger protein, subfamily 1A, 1 (Ikaros)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      64871690..64973685 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028845776.1 → XP_028701609.1  DNA-binding protein Ikaros isoform X7

      UniProtKB/TrEMBL
      A0A5F8AED3, G7MLB0
      Related
      ENSMMUP00000076243.1, ENSMMUT00000087995.1
      Conserved Domains (2) summary
      COG5048
      Location:1 → 131
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:60 → 80
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_028845777.1 → XP_028701610.1  DNA-binding protein Ikaros isoform X8

      UniProtKB/TrEMBL
      G7MLB0
      Conserved Domains (2) summary
      COG5048
      Location:1 → 131
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:60 → 80
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_028845774.1 → XP_028701607.1  DNA-binding protein Ikaros isoform X7

      UniProtKB/TrEMBL
      A0A5F8AED3, G7MLB0
      Related
      ENSMMUP00000000691.3, ENSMMUT00000000745.4
      Conserved Domains (2) summary
      COG5048
      Location:1 → 131
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:60 → 80
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_028845770.1 → XP_028701603.1  DNA-binding protein Ikaros isoform X3

      UniProtKB/TrEMBL
      F6YC72, G7MLB0
      Related
      ENSMMUP00000062160.1, ENSMMUT00000080711.1
      Conserved Domains (2) summary
      sd00017
      Location:119 → 139
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:132 → 156
      zf-H2C2_2; Zinc-finger double domain

    5. XM_028845773.1 → XP_028701606.1  DNA-binding protein Ikaros isoform X6

      UniProtKB/TrEMBL
      G7MLB0
      Conserved Domains (3) summary
      sd00017
      Location:80 → 100
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:78 → 100
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:92 → 117
      zf-H2C2_2; Zinc-finger double domain

    6. XM_015133500.2 → XP_014988986.2  DNA-binding protein Ikaros isoform X2

      UniProtKB/TrEMBL
      G7MLB0
      Conserved Domains (3) summary
      COG5048
      Location:163 → 505
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:139 → 159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152 → 176
      zf-H2C2_2; Zinc-finger double domain

    7. XM_028845767.1 → XP_028701600.1  DNA-binding protein Ikaros isoform X1

      UniProtKB/TrEMBL
      G7MLB0
      Conserved Domains (2) summary
      sd00017
      Location:139 → 159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152 → 176
      zf-H2C2_2; Zinc-finger double domain

    8. XM_028845769.1 → XP_028701602.1  DNA-binding protein Ikaros isoform X1

      UniProtKB/TrEMBL
      G7MLB0
      Conserved Domains (2) summary
      sd00017
      Location:139 → 159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152 → 176
      zf-H2C2_2; Zinc-finger double domain

    9. XM_028845771.1 → XP_028701604.1  DNA-binding protein Ikaros isoform X3

      UniProtKB/TrEMBL
      F6YC72, G7MLB0
      Related
      ENSMMUP00000035299.1, ENSMMUT00000042300.3
      Conserved Domains (2) summary
      sd00017
      Location:119 → 139
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:132 → 156
      zf-H2C2_2; Zinc-finger double domain

    10. XM_028845775.1 → XP_028701608.1  DNA-binding protein Ikaros isoform X7

      UniProtKB/TrEMBL
      A0A5F8AED3, G7MLB0
      Conserved Domains (2) summary
      COG5048
      Location:1 → 131
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:60 → 80
      ZF_C2H2; C2H2 Zn finger [structural motif]

    11. XM_028845768.1 → XP_028701601.1  DNA-binding protein Ikaros isoform X1

      UniProtKB/TrEMBL
      G7MLB0
      Conserved Domains (2) summary
      sd00017
      Location:139 → 159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152 → 176
      zf-H2C2_2; Zinc-finger double domain

    12. XM_028845772.1 → XP_028701605.1  DNA-binding protein Ikaros isoform X5

      UniProtKB/TrEMBL
      F6YC56, G7MLB0
      Related
      ENSMMUP00000000687.3, ENSMMUT00000000741.4
      Conserved Domains (3) summary
      COG5048
      Location:97 → 253
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:73 → 93
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:86 → 110
      zf-H2C2_2; Zinc-finger double domain

    13. XM_015133507.2 → XP_014988993.1  DNA-binding protein Ikaros isoform X9

      Conserved Domains (4) summary
      COG5048
      Location:31 → 105
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:34 → 54
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:32 → 54
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:46 → 71
      zf-H2C2_2; Zinc-finger double domain

    14. XM_015133503.2 → XP_014988989.1  DNA-binding protein Ikaros isoform X4

      UniProtKB/TrEMBL
      G7MLB0
      Conserved Domains (3) summary
      COG5048
      Location:117 → 273
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:93 → 113
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:106 → 130
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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