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    CAPN10 calpain 10 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716360, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CAPN10provided by VGNC
    Official Full Name
    calpain 10provided by VGNC
    Primary source
    VGNC:VGNC:70530
    See related
    Ensembl:ENSMMUG00000015628
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CAPN10 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (127950244..127966306)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (123319413..123333134)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and MYND domain containing 1 Neighboring gene dual specificity phosphatase 28 Neighboring gene arginyl aminopeptidase like 1 Neighboring gene G protein-coupled receptor 35 Neighboring gene E3 ubiquitin-protein ligase ARIH2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium-dependent cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calpain-10
    XP_001107045.4
    XP_002799152.3
    XP_014967000.2
    XP_014967001.2
    XP_014967003.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      127950244..127966306
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001107045.4 → XP_001107045.4  calpain-10 isoform X3

      UniProtKB/TrEMBL
      A0A5K1V6E3, F6RMD5, H9FPA8, I2CTV9
      Related
      ENSMMUP00000020518.4, ENSMMUT00000021934.4
      Conserved Domains (2) summary
      cd00044
      Location:2 → 319
      CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
      cd00214
      Location:335 → 496
      Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...

    2. XM_002799106.3 → XP_002799152.3  calpain-10 isoform X4

      UniProtKB/TrEMBL
      F6RMD5, H9FPA8
      Conserved Domains (2) summary
      cd00044
      Location:2 → 319
      CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
      cd00214
      Location:335 → 496
      Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...

    3. XM_015111514.2 → XP_014967000.2  calpain-10 isoform X1

      UniProtKB/TrEMBL
      F6RU11
      Related
      ENSMMUP00000020511.4, ENSMMUT00000021927.4
      Conserved Domains (2) summary
      cd00214
      Location:393 → 554
      Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
      cl00051
      Location:2 → 153
      CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.

    4. XM_015111515.2 → XP_014967001.2  calpain-10 isoform X2

      UniProtKB/TrEMBL
      F6RU11
      Conserved Domains (2) summary
      cd00214
      Location:393 → 554
      Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
      cl00051
      Location:2 → 153
      CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.

    5. XM_015111517.2 → XP_014967003.2  calpain-10 isoform X5

      Conserved Domains (2) summary
      cd00044
      Location:2 → 319
      CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
      cl00165
      Location:335 → 426
      Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
    Nucleotide Protein
    Heading Accession and Version

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