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    HMGN5 high mobility group nucleosome binding domain 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709253, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HMGN5provided by VGNC
    Official Full Name
    high mobility group nucleosome binding domain 5provided by VGNC
    Primary source
    VGNC:VGNC:73581
    See related
    Ensembl:ENSMMUG00000049618
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See HMGN5 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (77889832..77916062, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (74997877..75077245, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2 L3 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L34 pseudogene Neighboring gene SH3 domain binding glutamate rich protein like Neighboring gene vacuolar protein-sorting-associated protein 36 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleosomal DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    high mobility group nucleosome-binding domain-containing protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      77889832..77916062 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028842284.1 → XP_028698117.1  high mobility group nucleosome-binding domain-containing protein 5 isoform X2

      UniProtKB/TrEMBL
      A0A5F8AT60
      Related
      ENSMMUP00000080090.1, ENSMMUT00000094791.1
      Conserved Domains (1) summary
      pfam01101
      Location:3 → 83
      HMG14_17; HMG14 and HMG17

    2. XM_028842283.1 → XP_028698116.1  high mobility group nucleosome-binding domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      F7G387
      Related
      ENSMMUP00000071227.1, ENSMMUT00000104389.1
      Conserved Domains (1) summary
      pfam01101
      Location:1 → 93
      HMG14_17; HMG14 and HMG17
    Nucleotide Protein
    Heading Accession and Version

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