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    TXNL4B thioredoxin like 4B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706840, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TXNL4Bprovided by VGNC
    Official Full Name
    thioredoxin like 4Bprovided by VGNC
    Primary source
    VGNC:VGNC:104764
    Locus tag
    EGK_12956
    See related
    Ensembl:ENSMMUG00000049699
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TXNL4B in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (59418096..59489144)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (56672726..56730805)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114674279 Neighboring gene polyamine modulated factor 1 binding protein 1 Neighboring gene uncharacterized LOC114674281 Neighboring gene DEAH-box helicase 38 Neighboring gene uncharacterized LOC114674280 Neighboring gene haptoglobin-like Neighboring gene haptoglobin Neighboring gene dihydroorotate dehydrogenase (quinone) Neighboring gene coiled-coil domain-containing protein 25-like Neighboring gene polycystin 1 like 3, transient receptor potential channel interacting

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of U4/U6 x U5 tri-snRNP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U5 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    thioredoxin-like protein 4B
    Names
    Dim1-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257626.1 → NP_001244555.1  thioredoxin-like protein 4B

      See identical proteins and their annotated locations for NP_001244555.1

      Status: PROVISIONAL

      Source sequence(s)
      JU322032
      UniProtKB/TrEMBL
      A0A8J8YJ01, F6Z0Q0, G7NQN3
      Conserved Domains (1) summary
      cd02986
      Location:10 → 123
      DLP; Dim1 family, Dim1-like protein (DLP) subfamily; DLP is a novel protein which shares 38% sequence identity to Dim1. Like Dim1, it is also implicated in pre-mRNA splicing and cell cycle progression. DLP is located in the nucleus and has been shown to ...

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      59418096..59489144
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028840484.1 → XP_028696317.1  thioredoxin-like protein 4B isoform X1

      Conserved Domains (1) summary
      cl00388
      Location:10 → 107
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

    2. XM_028840485.1 → XP_028696318.1  thioredoxin-like protein 4B isoform X1

      Conserved Domains (1) summary
      cl00388
      Location:10 → 107
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

    3. XM_028840487.1 → XP_028696320.1  thioredoxin-like protein 4B isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZDP7, A0A5F8AL70
      Related
      ENSMMUP00000068647.1, ENSMMUT00000096157.1
      Conserved Domains (1) summary
      cl00388
      Location:10 → 107
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

    4. XM_028840492.1 → XP_028696325.1  thioredoxin-like protein 4B isoform X6

      Conserved Domains (1) summary
      cl00388
      Location:10 → 96
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

    5. XM_015126574.2 → XP_014982060.1  thioredoxin-like protein 4B isoform X4

      UniProtKB/TrEMBL
      A0A8J8YJ01, F6Z0Q0, G7NQN3
      Related
      ENSMMUP00000073255.1, ENSMMUT00000097820.1
      Conserved Domains (1) summary
      cd02986
      Location:10 → 123
      DLP; Dim1 family, Dim1-like protein (DLP) subfamily; DLP is a novel protein which shares 38% sequence identity to Dim1. Like Dim1, it is also implicated in pre-mRNA splicing and cell cycle progression. DLP is located in the nucleus and has been shown to ...

    6. XM_015126569.2 → XP_014982055.2  thioredoxin-like protein 4B isoform X1

      Conserved Domains (1) summary
      cl00388
      Location:10 → 107
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

    7. XM_028840488.1 → XP_028696321.1  thioredoxin-like protein 4B isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZDP7
      Conserved Domains (1) summary
      cl00388
      Location:10 → 107
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

    8. XM_028840490.1 → XP_028696323.1  thioredoxin-like protein 4B isoform X5

      Conserved Domains (1) summary
      cl00388
      Location:10 → 99
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

    9. XM_028840491.1 → XP_028696324.1  thioredoxin-like protein 4B isoform X6

      Conserved Domains (1) summary
      cl00388
      Location:10 → 96
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

    10. XM_028840486.1 → XP_028696319.1  thioredoxin-like protein 4B isoform X1

      Conserved Domains (1) summary
      cl00388
      Location:10 → 107
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
    Nucleotide Protein
    Heading Accession and Version

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