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    SOX10 SRY-box transcription factor 10 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702319, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SOX10provided by VGNC
    Official Full Name
    SRY-box transcription factor 10provided by VGNC
    Primary source
    VGNC:VGNC:108059
    See related
    Ensembl:ENSMMUG00000052236
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SOX10 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (13553621..13566203)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (79983094..79995597, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene protein interacting with PRKCA 1 Neighboring gene uncharacterized LOC107000660 Neighboring gene RNA polymerase II, I and III subunit F Neighboring gene chromosome 10 C22orf23 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in enteric nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in morphogenesis of an epithelium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neural crest cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peripheral nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor SOX-10
    Names
    SRY (sex determining region Y)-box 10
    SRY-box 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      13553621..13566203
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002798399.3 → XP_002798445.1  transcription factor SOX-10

      See identical proteins and their annotated locations for XP_002798445.1

      UniProtKB/TrEMBL
      A0A5F7ZM79, H9FYV0
      Related
      ENSMMUP00000065720.1, ENSMMUT00000079960.1
      Conserved Domains (2) summary
      cd01388
      Location:104 → 174
      SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
      pfam12444
      Location:12 → 94
      Sox_N; Sox developmental protein N terminal
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials