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    DDX55 DEAD-box helicase 55 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709884, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DDX55provided by VGNC
    Official Full Name
    DEAD-box helicase 55provided by VGNC
    Primary source
    VGNC:VGNC:71681
    See related
    Ensembl:ENSMMUG00000013178
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DDX55 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (123491334..123511006)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (123622445..123641393)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene cytochrome b-c1 complex subunit Rieske, mitochondrial Neighboring gene transmembrane p24 trafficking protein 2 Neighboring gene small nucleolar RNA SNORA9 Neighboring gene uncharacterized LOC106992485 Neighboring gene eukaryotic translation initiation factor 2B subunit alpha Neighboring gene general transcription factor IIH subunit 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-dependent RNA helicase DDX55
    XP_002798866.1
    XP_014965113.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      123491334..123511006
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002798820.3 → XP_002798866.1  ATP-dependent RNA helicase DDX55 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q7K6
      Related
      ENSMMUP00000081169.1, ENSMMUT00000104413.1
      Conserved Domains (3) summary
      cd18787
      Location:242 → 372
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cd17960
      Location:20 → 224
      DEADc_DDX55; DEAD-box helicase domain of DEAD box protein 55
      pfam13959
      Location:405 → 462
      DUF4217; Domain of unknown function (DUF4217)

    2. XM_015109627.2 → XP_014965113.1  ATP-dependent RNA helicase DDX55 isoform X2

      UniProtKB/TrEMBL
      H9F7L0
      Related
      ENSMMUP00000017310.3, ENSMMUT00000018486.4
      Conserved Domains (3) summary
      COG0513
      Location:1 → 366
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd17960
      Location:1 → 181
      DEADc_DDX55; DEAD-box helicase domain of DEAD box protein 55
      pfam13959
      Location:362 → 419
      DUF4217; Domain of unknown function (DUF4217)

    RNA

    1. XR_001438431.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials