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    PNPLA4 patatin like phospholipase domain containing 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708139, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PNPLA4provided by VGNC
    Official Full Name
    patatin like phospholipase domain containing 4provided by VGNC
    Primary source
    VGNC:VGNC:81507
    See related
    Ensembl:ENSMMUG00000018194
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human all
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    Genomic context

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    See PNPLA4 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (7217619..7462958, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (6711393..6956563, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene pseudouridine 5'-phosphatase Neighboring gene steroid sulfatase Neighboring gene uncharacterized LOC114674856 Neighboring gene variable charge X-linked-like pseudogene Neighboring gene uncharacterized LOC114674912 Neighboring gene variable charge X-linked-like Neighboring gene microRNA mir-651

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables retinyl-palmitate esterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables triacylglycerol lipase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in triglyceride catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lipid droplet IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    patatin-like phospholipase domain-containing protein 4
    NP_001180773.1
    XP_014982391.1
    XP_014982392.1
    XP_028697629.1
    XP_028697630.1
    XP_028697631.1
    XP_028697632.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193844.2 → NP_001180773.1  patatin-like phospholipase domain-containing protein 4

      See identical proteins and their annotated locations for NP_001180773.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02003164
      UniProtKB/TrEMBL
      F7E9K3, G7NS27
      Related
      ENSMMUP00000023933.2, ENSMMUT00000025579.4
      Conserved Domains (1) summary
      cd07222
      Location:5 → 250
      Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      7217619..7462958 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015126905.2 → XP_014982391.1  patatin-like phospholipase domain-containing protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZD64, A0A5F8AQJ5
      Related
      ENSMMUP00000063522.1, ENSMMUT00000080511.1
      Conserved Domains (1) summary
      cd07222
      Location:5 → 214
      Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

    2. XM_028841796.1 → XP_028697629.1  patatin-like phospholipase domain-containing protein 4 isoform X3

      UniProtKB/TrEMBL
      A0A5F8AQJ5
      Conserved Domains (1) summary
      cd07222
      Location:5 → 214
      Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

    3. XM_028841797.1 → XP_028697630.1  patatin-like phospholipase domain-containing protein 4 isoform X4

      UniProtKB/TrEMBL
      A0A5F8AQJ5
      Related
      ENSMMUP00000079346.1, ENSMMUT00000092551.1
      Conserved Domains (1) summary
      cd07222
      Location:5 → 214
      Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

    4. XM_028841799.1 → XP_028697632.1  patatin-like phospholipase domain-containing protein 4 isoform X6

      UniProtKB/TrEMBL
      H9EZ63
      Conserved Domains (1) summary
      cd07222
      Location:5 → 211
      Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

    5. XM_015126906.2 → XP_014982392.1  patatin-like phospholipase domain-containing protein 4 isoform X2

      UniProtKB/TrEMBL
      F7E9K3
      Related
      ENSMMUP00000076924.1, ENSMMUT00000086146.1
      Conserved Domains (1) summary
      cd07222
      Location:5 → 250
      Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

    6. XM_028841798.1 → XP_028697631.1  patatin-like phospholipase domain-containing protein 4 isoform X5

      UniProtKB/TrEMBL
      H9EZ63
      Related
      ENSMMUP00000062621.1, ENSMMUT00000090616.1
      Conserved Domains (1) summary
      cd07222
      Location:5 → 210
      Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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