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    SIN3A SIN3 transcription regulator family member A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705719, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SIN3Aprovided by VGNC
    Official Full Name
    SIN3 transcription regulator family member Aprovided by VGNC
    Primary source
    VGNC:VGNC:77275
    See related
    Ensembl:ENSMMUG00000009281
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SIN3A in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (52503964..52592218, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (52695557..52833028, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene nei like DNA glycosylase 1 Neighboring gene microRNA mir-631 Neighboring gene mannosidase alpha class 2C member 1 Neighboring gene 60S ribosomal protein L13 pseudogene Neighboring gene uncharacterized LOC114679456 Neighboring gene protein tyrosine phosphatase non-receptor type 9 Neighboring gene small nuclear ribonucleoprotein F-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    paired amphipathic helix protein Sin3a
    Names
    SIN3 homolog A, transcription regulator
    SIN3 transcription regulator homolog A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266100.1 → NP_001253029.1  paired amphipathic helix protein Sin3a

      See identical proteins and their annotated locations for NP_001253029.1

      Status: PROVISIONAL

      Source sequence(s)
      JV046691
      UniProtKB/TrEMBL
      A0A5F8A0E7, F7H3V1
      Conserved Domains (1) summary
      COG5602
      Location:5 → 1213
      Sin3; Histone deacetylase complex, regulatory component SIN3 [Chromatin structure and dynamics]

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      52503964..52592218 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028850317.1 → XP_028706150.1  paired amphipathic helix protein Sin3a isoform X1

      UniProtKB/TrEMBL
      A0A5F8A0E7, F7H3V1
      Related
      ENSMMUP00000012162.2, ENSMMUT00000012974.4
      Conserved Domains (1) summary
      COG5602
      Location:5 → 1213
      Sin3; Histone deacetylase complex, regulatory component SIN3 [Chromatin structure and dynamics]

    2. XM_028850316.1 → XP_028706149.1  paired amphipathic helix protein Sin3a isoform X1

      UniProtKB/TrEMBL
      A0A5F8A0E7, F7H3V1
      Conserved Domains (1) summary
      COG5602
      Location:5 → 1213
      Sin3; Histone deacetylase complex, regulatory component SIN3 [Chromatin structure and dynamics]

    3. XM_028850318.1 → XP_028706151.1  paired amphipathic helix protein Sin3a isoform X2

      UniProtKB/TrEMBL
      A0A5F8A0E7
      Conserved Domains (1) summary
      COG5602
      Location:1 → 1147
      Sin3; Histone deacetylase complex, regulatory component SIN3 [Chromatin structure and dynamics]
    Nucleotide Protein
    Heading Accession and Version

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