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    TRPM1 transient receptor potential cation channel subfamily M member 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 720596, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TRPM1provided by VGNC
    Official Full Name
    transient receptor potential cation channel subfamily M member 1provided by VGNC
    Primary source
    VGNC:VGNC:79964
    See related
    Ensembl:ENSMMUG00000009430
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TRPM1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (7179335..7247577)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (6884854..6960642, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene KLF transcription factor 13 Neighboring gene WAS/WASL-interacting protein family member 3 Neighboring gene uncharacterized LOC114679349 Neighboring gene uncharacterized LOC106999104 Neighboring gene microRNA mir-211 Neighboring gene U6 spliceosomal RNA Neighboring gene myotubularin related protein 10 Neighboring gene FANCD2 and FANCI associated nuclease 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transport into cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein tetramerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transient receptor potential cation channel subfamily M member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      7179335..7247577
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028850659.1 → XP_028706492.1  transient receptor potential cation channel subfamily M member 1

      UniProtKB/TrEMBL
      F6VDS3, G7MW88
      Related
      ENSMMUP00000045908.1, ENSMMUT00000066760.2
      Conserved Domains (3) summary
      TIGR00870
      Location:727 → 1125
      trp; transient-receptor-potential calcium channel protein
      pfam16519
      Location:1198 → 1249
      TRPM_tetra; Tetramerisation domain of TRPM
      cl19167
      Location:238 → 311
      Bac_export_2; FlhB HrpN YscU SpaS Family
    Nucleotide Protein
    Heading Accession and Version

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