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    PPARD peroxisome proliferator activated receptor delta [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718861, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PPARDprovided by VGNC
    Official Full Name
    peroxisome proliferator activated receptor deltaprovided by VGNC
    Primary source
    VGNC:VGNC:76228
    Locus tag
    EGK_14816
    See related
    Ensembl:ENSMMUG00000015904
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PPARD in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (134061132..134146876, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (36251948..36338227)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L10a Neighboring gene FA complementation group E Neighboring gene small nucleolar RNA SNORA16B/SNORA16A family Neighboring gene DEF6 guanine nucleotide exchange factor Neighboring gene zinc finger protein 76 Neighboring gene homeobox protein Hox-A4-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in hormone-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peroxisome proliferator-activated receptor delta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      134061132..134146876 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015136203.2 → XP_014991689.1  peroxisome proliferator-activated receptor delta isoform X2

      UniProtKB/TrEMBL
      A0A5F8AHI2, A0A8J8YK55, F7ATF0, F7ATF8, G7MRT0
      Related
      ENSMMUP00000020908.4, ENSMMUT00000022349.4
      Conserved Domains (2) summary
      cd06932
      Location:173 → 440
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:73 → 156
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers

    2. XM_015136201.2 → XP_014991687.1  peroxisome proliferator-activated receptor delta isoform X1

      UniProtKB/TrEMBL
      F7ATF8
      Conserved Domains (2) summary
      cd06932
      Location:201 → 468
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101 → 184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers

    3. XM_015136204.2 → XP_014991690.1  peroxisome proliferator-activated receptor delta isoform X3

      Conserved Domains (2) summary
      cd06932
      Location:75 → 342
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cl02596
      Location:41 → 58
      NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers

    4. XM_015136202.2 → XP_014991688.1  peroxisome proliferator-activated receptor delta isoform X2

      UniProtKB/TrEMBL
      A0A5F8AHI2, A0A8J8YK55, F7ATF0, F7ATF8, G7MRT0
      Related
      ENSMMUP00000077310.1, ENSMMUT00000100707.1
      Conserved Domains (2) summary
      cd06932
      Location:173 → 440
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:73 → 156
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers

    5. XM_015136199.2 → XP_014991685.1  peroxisome proliferator-activated receptor delta isoform X1

      UniProtKB/TrEMBL
      F7ATF8
      Conserved Domains (2) summary
      cd06932
      Location:201 → 468
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101 → 184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers

    6. XM_028847643.1 → XP_028703476.1  peroxisome proliferator-activated receptor delta isoform X2

      UniProtKB/TrEMBL
      A0A5F8AHI2, A0A8J8YK55, F7ATF0, F7ATF8, G7MRT0
      Related
      ENSMMUP00000075619.1, ENSMMUT00000084053.1
      Conserved Domains (2) summary
      cd06932
      Location:173 → 440
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:73 → 156
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers

    7. XM_015136200.2 → XP_014991686.1  peroxisome proliferator-activated receptor delta isoform X1

      UniProtKB/TrEMBL
      F7ATF8
      Conserved Domains (2) summary
      cd06932
      Location:201 → 468
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101 → 184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers

    8. XM_028847644.1 → XP_028703477.1  peroxisome proliferator-activated receptor delta isoform X2

      UniProtKB/TrEMBL
      A0A5F8AHI2, A0A8J8YK55, F7ATF0, F7ATF8, G7MRT0
      Related
      ENSMMUP00000020907.4, ENSMMUT00000022348.4
      Conserved Domains (2) summary
      cd06932
      Location:173 → 440
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:73 → 156
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers

    9. XM_028847642.1 → XP_028703475.1  peroxisome proliferator-activated receptor delta isoform X1

      UniProtKB/TrEMBL
      F7ATF8
      Conserved Domains (2) summary
      cd06932
      Location:201 → 468
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101 → 184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers

    10. XM_028847641.1 → XP_028703474.1  peroxisome proliferator-activated receptor delta isoform X1

      UniProtKB/TrEMBL
      F7ATF8
      Conserved Domains (2) summary
      cd06932
      Location:201 → 468
      NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
      cd06965
      Location:101 → 184
      NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
    Nucleotide Protein
    Heading Accession and Version

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