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    SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712130, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SMARCD1provided by VGNC
    Official Full Name
    SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1provided by VGNC
    Primary source
    VGNC:VGNC:77653
    See related
    Ensembl:ENSMMUG00000006531
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SMARCD1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (49691062..49706563)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (48368774..48384257)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene Rac GTPase activating protein 1 Neighboring gene acid sensing ion channel subunit 1 Neighboring gene uncharacterized protein C12orf62-like Neighboring gene developmental pluripotency-associated protein 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SWI/SNF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      49691062..49706563
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001111275.4 → XP_001111275.3  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1

      Related
      ENSMMUP00000008602.4, ENSMMUT00000009155.4
      Conserved Domains (3) summary
      smart00151
      Location:420 → 496
      SWIB; SWI complex, BAF60b domains
      COG5531
      Location:336 → 537
      Rsc6; Chromatin remodeling complex protein RSC6, contains SWIB domain [Chromatin structure and dynamics]
      pfam02084
      Location:168 → 227
      Bindin; Bindin

    2. XM_001111166.4 → XP_001111166.3  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5REM3
      Related
      ENSMMUP00000058766.2, ENSMMUT00000059020.2
      Conserved Domains (3) summary
      smart00151
      Location:379 → 455
      SWIB; SWI complex, BAF60b domains
      COG5531
      Location:284 → 496
      Rsc6; Chromatin remodeling complex protein RSC6, contains SWIB domain [Chromatin structure and dynamics]
      pfam02084
      Location:168 → 227
      Bindin; Bindin

    3. XM_001111207.4 → XP_001111207.3  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X3

      UniProtKB/TrEMBL
      F7HTY2
      Related
      ENSMMUP00000008601.4, ENSMMUT00000009154.4
      Conserved Domains (3) summary
      smart00151
      Location:420 → 496
      SWIB; SWI complex, BAF60b domains
      COG5531
      Location:336 → 537
      Rsc6; Chromatin remodeling complex protein RSC6, contains SWIB domain [Chromatin structure and dynamics]
      pfam02084
      Location:168 → 227
      Bindin; Bindin
    Nucleotide Protein
    Heading Accession and Version

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