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    SLC6A7 solute carrier family 6 member 7 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711915, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC6A7provided by VGNC
    Official Full Name
    solute carrier family 6 member 7provided by VGNC
    Primary source
    VGNC:VGNC:77623
    Locus tag
    EGK_17021
    See related
    Ensembl:ENSMMUG00000011559
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SLC6A7 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (147704510..147725079)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (148325259..148345780)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene platelet derived growth factor receptor beta Neighboring gene caudal type homeobox 1 Neighboring gene calcium/calmodulin dependent protein kinase II alpha Neighboring gene arylsulfatase family member I

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-proline transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium-dependent proline transporter
    Names
    solute carrier family 6 (neurotransmitter transporter, L-proline), member 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266791.2 → NP_001253720.1  sodium-dependent proline transporter

      See identical proteins and their annotated locations for NP_001253720.1

      Status: PROVISIONAL

      Source sequence(s)
      JV667283
      UniProtKB/TrEMBL
      A0A8J8XNF5, F7BSV0, G7MVM1, H9FYN5
      Related
      ENSMMUP00000015172.2, ENSMMUT00000016190.4
      Conserved Domains (1) summary
      cd11500
      Location:37 → 581
      SLC6sbd_PROT; Na(+)- and Cl(-)-dependent L-proline transporter PROT; solute-binding domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      147704510..147725079
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015141181.2 → XP_014996667.1  sodium-dependent proline transporter isoform X1

      UniProtKB/TrEMBL
      H9FYN5
      Conserved Domains (1) summary
      cl00456
      Location:1 → 500
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    2. XM_015141184.2 → XP_014996670.1  sodium-dependent proline transporter isoform X1

      UniProtKB/TrEMBL
      H9FYN5
      Conserved Domains (1) summary
      cl00456
      Location:1 → 500
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
    Nucleotide Protein
    Heading Accession and Version

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