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    TRIM27 tripartite motif containing 27 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706129, updated on 17-Aug-2024

    Summary

    Official Symbol
    TRIM27provided by VGNC
    Official Full Name
    tripartite motif containing 27provided by VGNC
    Primary source
    VGNC:VGNC:81596
    Locus tag
    EGK_14629
    See related
    Ensembl:ENSMMUG00000015961
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    RFP
    Orthologs
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    Genomic context

    See TRIM27 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (141323295..141346964)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (29367389..29391046, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106997829 Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene transfer RNA leucine (anticodon CAA) Neighboring gene U6 spliceosomal RNA Neighboring gene transfer RNA leucine (anticodon CAA) Neighboring gene transfer RNA arginine (anticodon CCG)

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    zinc finger protein RFP
    Names
    ret finger protein
    NP_001247721.1
    XP_014991123.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260792.1NP_001247721.1  zinc finger protein RFP

      See identical proteins and their annotated locations for NP_001247721.1

      Status: PROVISIONAL

      Source sequence(s)
      JV047842
      UniProtKB/TrEMBL
      A0A1D5Q9P9, A0A1D5QSL3, A0A8J8XF49, F7DCK3, G7MRB9
      Related
      ENSMMUP00000051041.2, ENSMMUT00000074369.2
      Conserved Domains (4) summary
      COG1196
      Location:140312
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd15814
      Location:315491
      SPRY_PRY_TRIM27; PRY/SPRY domain in tripartite motif-containing protein 27 (TRIM27), also known as RING finger protein 76 (RNF76)
      cd16594
      Location:1357
      RING-HC_TRIM11_like_C-IV; RING finger, HC subclass, found in tripartite motif-containing proteins, TRIM11 and TRIM27, and similar proteins
      cd19762
      Location:94137
      Bbox2_TRIM7-like; B-box-type 2 zinc finger found in tripartite motif-containing proteins TRIM7, TRIM27 and similar proteins

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      141323295..141346964
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015135637.2XP_014991123.1  zinc finger protein RFP isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q9P9
      Conserved Domains (3) summary
      cd00021
      Location:95132
      BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
      cd00162
      Location:1560
      RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
      cl02614
      Location:238414
      SPRY; SPRY domain