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    SNRPB small nuclear ribonucleoprotein polypeptides B and B1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716578, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SNRPBprovided by VGNC
    Official Full Name
    small nuclear ribonucleoprotein polypeptides B and B1provided by VGNC
    Primary source
    VGNC:VGNC:77676
    See related
    Ensembl:ENSMMUG00000010050
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SNRPB in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (64030821..64039956)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (35285480..35294621, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene transmembrane channel like 2 Neighboring gene zinc finger protein 343 Neighboring gene transglutaminase 6 Neighboring gene transglutaminase 3 Neighboring gene ATP synthase subunit f, mitochondrial pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of U1 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U2 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U2-type prespliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U4 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U4/U6 x U5 tri-snRNP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U5 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    small nuclear ribonucleoprotein-associated proteins B and B'
    Names
    small nuclear ribonucleoprotein-associated protein N

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257716.1 → NP_001244645.1  small nuclear ribonucleoprotein-associated proteins B and B'

      See identical proteins and their annotated locations for NP_001244645.1

      Status: PROVISIONAL

      Source sequence(s)
      JU320714
      UniProtKB/TrEMBL
      A0A1D5Q2L1, H9EYN3
      Related
      ENSMMUP00000042273.1, ENSMMUT00000055443.2
      Conserved Domains (1) summary
      cd01717
      Location:5 → 83
      Sm_B; Sm protein B

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      64030821..64039956
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015149349.2 → XP_015004835.1  small nuclear ribonucleoprotein-associated proteins B and B' isoform X1

      UniProtKB/TrEMBL
      F6TEZ3, G7MW70, H9YV84
      Related
      ENSMMUP00000013142.4, ENSMMUT00000014033.4
      Conserved Domains (1) summary
      cd01717
      Location:5 → 83
      Sm_B; Sm protein B
    Nucleotide Protein
    Heading Accession and Version

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