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    NRDE2 NRDE-2, necessary for RNA interference, domain containing [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695676, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NRDE2provided by VGNC
    Official Full Name
    NRDE-2, necessary for RNA interference, domain containingprovided by VGNC
    Primary source
    VGNC:VGNC:75440
    See related
    Ensembl:ENSMMUG00000010442
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C14orf102; C7H14orf102
    Orthologs
    human mouse all
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    Genomic context

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    See NRDE2 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (152414969..152464764, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (152431682..152482450, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene potassium two pore domain channel subfamily K member 13 Neighboring gene glutaredoxin-1 pseudogene Neighboring gene proteasome 26S subunit, ATPase 1 Neighboring gene uncharacterized LOC114679620 Neighboring gene calmodulin 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of RNA catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulatory ncRNA-mediated post-transcriptional gene silencing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear exosome regulator NRDE2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193888.2 → NP_001180817.2  nuclear exosome regulator NRDE2

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000421
      UniProtKB/TrEMBL
      F7CR99, H9YZ13
      Related
      ENSMMUP00000013696.4, ENSMMUT00000014620.4
      Conserved Domains (2) summary
      pfam08424
      Location:313 → 645
      NRDE-2; necessary for RNA interference
      cd22200
      Location:162 → 258
      NRDE2_MID; MTR4-interacting domain (MID) found in nuclear exosome regulator NRDE2 and similar proteins

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      152414969..152464764 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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