LRWD1 leucine rich repeats and WD repeat domain containing 1 [Macaca mulatta (Rhesus monkey)] - Gene

Summary

Official Symbol: LRWD1provided by VGNC
Official Full Name: leucine rich repeats and WD repeat domain containing 1provided by VGNC
Primary source: VGNC:VGNC:74332
See related: Ensembl:ENSMMUG00000012021
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Macaca mulatta
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
103	current	Mmul_10 (GCF_003339765.1)	3	NC_041756.1 (44585168..44593118)
102	previous assembly	Mmul_8.0.1 (GCF_000772875.2)	3	NC_027895.1 (127863858..127871827)

Chromosome 3 - NC_041756.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

STS-H73947 (e-PCR)
- UniSTS:5192

STS-L37127 (e-PCR)
- UniSTS:6631

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables chromatin binding	IEA Inferred from Electronic Annotation more info	PubMed
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in chromatin organization	IEA Inferred from Electronic Annotation more info	PubMed
involved_in establishment of protein localization to chromatin	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of nuclear origin of replication recognition complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: leucine-rich repeat and WD repeat-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001266042.1 → NP_001252971.1 leucine-rich repeat and WD repeat-containing protein 1

See identical proteins and their annotated locations for NP_001252971.1

Status: PROVISIONAL

Source sequence(s)

JU473171

UniProtKB/TrEMBL

G7MNX9, H9Z209

Related

ENSMMUP00000071532.1, ENSMMUT00000105622.1

Conserved Domains (6) summary

COG2319
Location:309 → 584

WD40; WD40 repeat [General function prediction only]

sd00031
Location:23 → 48

LRR_1; leucine-rich repeat [structural motif]

pfam12799
Location:47 → 87

LRR_4; Leucine Rich repeats (2 copies)

pfam13855
Location:47 → 103

LRR_8; Leucine rich repeat

sd00039
Location:295 → 337

7WD40; WD40 repeat [structural motif]

cl02567
Location:308 → 567

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

NC_041756.1 Reference Mmul_10 Primary Assembly

Range

44585168..44593118

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_015134541.2 → XP_014990027.2 leucine-rich repeat and WD repeat-containing protein 1 isoform X1

Conserved Domains (2) summary

sd00039
Location:206 → 238

7WD40; WD40 repeat [structural motif]

cl29593
Location:156 → 415

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...