U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TRA2A transformer 2 alpha homolog [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 574247, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TRA2Aprovided by VGNC
    Official Full Name
    transformer 2 alpha homologprovided by VGNC
    Primary source
    VGNC:VGNC:79040
    See related
    Ensembl:ENSMMUG00000006286
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TRA2A in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (91576679..91605794)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (84697359..84726259)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene dual specificity protein kinase CLK2 pseudogene Neighboring gene ATP-binding cassette sub-family E member 1 pseudogene Neighboring gene 40S ribosomal protein S2 pseudogene Neighboring gene insulin like growth factor 2 mRNA binding protein 3 Neighboring gene U7 small nuclear RNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    transformer-2 protein homolog alpha
    Names
    transformer-2 alpha

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001258113.1 → NP_001245042.1  transformer-2 protein homolog alpha

      See identical proteins and their annotated locations for NP_001245042.1

      Status: PROVISIONAL

      Source sequence(s)
      JU475328
      UniProtKB/TrEMBL
      G7MLN8, H9H310
      Related
      ENSMMUP00000006174.2, ENSMMUT00000006564.4
      Conserved Domains (1) summary
      cd12363
      Location:118 → 197
      RRM_TRA2; RNA recognition motif (RRM) found in transformer-2 protein homolog TRA2-alpha, TRA2-beta and similar proteins

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      91576679..91605794
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028844741.1 → XP_028700574.1  transformer-2 protein homolog alpha isoform X1

      UniProtKB/TrEMBL
      G7MLN8
      Conserved Domains (1) summary
      cd12363
      Location:118 → 197
      RRM_TRA2; RNA recognition motif (RRM) found in transformer-2 protein homolog TRA2-alpha, TRA2-beta and similar proteins

    2. XM_015133847.1 → XP_014989333.1  transformer-2 protein homolog alpha isoform X3

      Conserved Domains (1) summary
      cd12363
      Location:17 → 96
      RRM_TRA2; RNA recognition motif (RRM) found in transformer-2 protein homolog TRA2-alpha, TRA2-beta and similar proteins

    3. XM_015133842.2 → XP_014989328.1  transformer-2 protein homolog alpha isoform X3

      Conserved Domains (1) summary
      cd12363
      Location:17 → 96
      RRM_TRA2; RNA recognition motif (RRM) found in transformer-2 protein homolog TRA2-alpha, TRA2-beta and similar proteins

    4. XM_015133845.2 → XP_014989331.1  transformer-2 protein homolog alpha isoform X3

      Conserved Domains (1) summary
      cd12363
      Location:17 → 96
      RRM_TRA2; RNA recognition motif (RRM) found in transformer-2 protein homolog TRA2-alpha, TRA2-beta and similar proteins

    5. XM_015133846.1 → XP_014989332.1  transformer-2 protein homolog alpha isoform X3

      Conserved Domains (1) summary
      cd12363
      Location:17 → 96
      RRM_TRA2; RNA recognition motif (RRM) found in transformer-2 protein homolog TRA2-alpha, TRA2-beta and similar proteins

    6. XM_028844742.1 → XP_028700575.1  transformer-2 protein homolog alpha isoform X2

      Conserved Domains (1) summary
      cl17169
      Location:112 → 134
      RRM_SF; RNA recognition motif (RRM) superfamily

    7. XM_015133843.2 → XP_014989329.1  transformer-2 protein homolog alpha isoform X3

      Conserved Domains (1) summary
      cd12363
      Location:17 → 96
      RRM_TRA2; RNA recognition motif (RRM) found in transformer-2 protein homolog TRA2-alpha, TRA2-beta and similar proteins

    8. XM_015133844.2 → XP_014989330.1  transformer-2 protein homolog alpha isoform X3

      Conserved Domains (1) summary
      cd12363
      Location:17 → 96
      RRM_TRA2; RNA recognition motif (RRM) found in transformer-2 protein homolog TRA2-alpha, TRA2-beta and similar proteins
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials