U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TNFRSF12A TNF receptor superfamily member 12A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699970, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TNFRSF12Aprovided by VGNC
    Official Full Name
    TNF receptor superfamily member 12Aprovided by VGNC
    Primary source
    VGNC:VGNC:99623
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TNFRSF12A in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (3084504..3086571)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (3905563..3907631, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene claudin 9 Neighboring gene claudin 6 Neighboring gene host cell factor C1 regulator 1 Neighboring gene THO complex subunit 6 Neighboring gene BICD family like cargo adaptor 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tumor necrosis factor receptor superfamily member 12A
    Names
    tumor necrosis factor receptor superfamily, member 12A

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      3084504..3086571
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001089176.4 → XP_001089176.1  tumor necrosis factor receptor superfamily member 12A isoform X2

      See identical proteins and their annotated locations for XP_001089176.1

      UniProtKB/TrEMBL
      G7NP59
      Conserved Domains (2) summary
      cd13413
      Location:36 → 104
      TNFRSF12A; CRD2 [structural motif]
      pfam12191
      Location:23 → 129
      stn_TNFRSF12A; tumor necrosis factor receptor stn_TNFRSF12A_TNFR domain

    2. XM_028841455.1 → XP_028697288.1  tumor necrosis factor receptor superfamily member 12A isoform X1

      Conserved Domains (2) summary
      cd13413
      Location:68 → 136
      TNFRSF12A; CRD2 [structural motif]
      cl22855
      Location:59 → 161
      TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.