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    RPL9 ribosomal protein L9 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699362, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RPL9provided by VGNC
    Official Full Name
    ribosomal protein L9provided by VGNC
    Primary source
    VGNC:VGNC:107196
    See related
    Ensembl:ENSMMUG00000008553
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RPL9 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (38574911..38579542, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (39085006..39089634, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene klotho beta Neighboring gene lipoic acid synthetase Neighboring gene WD repeat-containing protein 5 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    large ribosomal subunit protein uL6; 60S ribosomal protein L9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193558.1 → NP_001180487.1  large ribosomal subunit protein uL6

      See identical proteins and their annotated locations for NP_001180487.1

      Status: VALIDATED

      Source sequence(s)
      CB311563
      UniProtKB/TrEMBL
      F6UQR0, G7MSR9, I0FJC8, I0FJC9
      Related
      ENSMMUP00000011218.4, ENSMMUT00000011959.4
      Conserved Domains (1) summary
      cl30086
      Location:1 → 191
      Ribosomal_L6; Ribosomal protein L6

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      38574911..38579542 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015138159.2 → XP_014993645.1  60S ribosomal protein L9 isoform X1

      UniProtKB/TrEMBL
      G7MSR9, I0FJC9
      Conserved Domains (2) summary
      PTZ00027
      Location:1 → 219
      PTZ00027; 60S ribosomal protein L6; Provisional
      pfam00347
      Location:127 → 206
      Ribosomal_L6; Ribosomal protein L6

    2. XM_015138160.2 → XP_014993646.1  60S ribosomal protein L9 isoform X2

      UniProtKB/TrEMBL
      F6UQR0, G7MSR9, I0FJC8, I0FJC9
      Conserved Domains (1) summary
      cl30086
      Location:1 → 191
      Ribosomal_L6; Ribosomal protein L6
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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