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    ARNT aryl hydrocarbon receptor nuclear translocator [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715971, updated on 5-Mar-2024

    Summary

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    Gene symbol
    ARNT
    Gene description
    aryl hydrocarbon receptor nuclear translocator
    See related
    Ensembl:ENSMMUG00000000541
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ARNT in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (100255411..100322397)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (125270524..125338873, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene SET domain bifurcated histone lysine methyltransferase 1 Neighboring gene cytochrome c-like Neighboring gene U6 spliceosomal RNA Neighboring gene cathepsin K Neighboring gene cathepsin S

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of aryl hydrocarbon receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aryl hydrocarbon receptor nuclear translocator

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      100255411..100322397
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015151767.2 → XP_015007253.2  aryl hydrocarbon receptor nuclear translocator isoform X3

      UniProtKB/TrEMBL
      A0A8J8XP86, F7A359, G7MDI4, H9FUE2
      Related
      ENSMMUP00000000731.4, ENSMMUT00000000789.4
      Conserved Domains (4) summary
      pfam14598
      Location:362 → 462
      PAS_11; PAS domain
      pfam00010
      Location:91 → 143
      HLH; Helix-loop-helix DNA-binding domain
      pfam00989
      Location:163 → 269
      PAS; PAS fold
      pfam03154
      Location:543 → 756
      Atrophin-1; Atrophin-1 family

    2. XM_015151775.2 → XP_015007261.2  aryl hydrocarbon receptor nuclear translocator isoform X6

      UniProtKB/TrEMBL
      F7A349, F7A359, I0FRP5
      Related
      ENSMMUP00000000732.4, ENSMMUT00000000790.4
      Conserved Domains (4) summary
      pfam14598
      Location:347 → 447
      PAS_11; PAS domain
      pfam00010
      Location:76 → 128
      HLH; Helix-loop-helix DNA-binding domain
      pfam00989
      Location:148 → 254
      PAS; PAS fold
      pfam03154
      Location:528 → 741
      Atrophin-1; Atrophin-1 family

    3. XM_015151777.2 → XP_015007263.2  aryl hydrocarbon receptor nuclear translocator isoform X7

      UniProtKB/TrEMBL
      F7A359
      Conserved Domains (4) summary
      pfam11593
      Location:508 → 718
      Med3; Mediator complex subunit 3 fungal
      pfam14598
      Location:347 → 447
      PAS_11; PAS domain
      pfam00010
      Location:76 → 128
      HLH; Helix-loop-helix DNA-binding domain
      pfam00989
      Location:148 → 254
      PAS; PAS fold

    4. XM_015151751.2 → XP_015007237.2  aryl hydrocarbon receptor nuclear translocator isoform X1

      UniProtKB/TrEMBL
      F7A359
      Conserved Domains (4) summary
      pfam14598
      Location:370 → 470
      PAS_11; PAS domain
      pfam00010
      Location:91 → 143
      HLH; Helix-loop-helix DNA-binding domain
      pfam00989
      Location:163 → 277
      PAS; PAS fold
      pfam03154
      Location:551 → 764
      Atrophin-1; Atrophin-1 family

    5. XM_015151758.2 → XP_015007244.2  aryl hydrocarbon receptor nuclear translocator isoform X2

      UniProtKB/TrEMBL
      F7A359
      Conserved Domains (4) summary
      pfam11593
      Location:531 → 741
      Med3; Mediator complex subunit 3 fungal
      pfam14598
      Location:370 → 470
      PAS_11; PAS domain
      pfam00010
      Location:91 → 143
      HLH; Helix-loop-helix DNA-binding domain
      pfam00989
      Location:163 → 277
      PAS; PAS fold

    6. XM_028829266.1 → XP_028685099.1  aryl hydrocarbon receptor nuclear translocator isoform X4

      UniProtKB/TrEMBL
      F7A359
      Related
      ENSMMUP00000056322.2, ENSMMUT00000067338.2
      Conserved Domains (4) summary
      pfam11593
      Location:523 → 733
      Med3; Mediator complex subunit 3 fungal
      pfam14598
      Location:362 → 462
      PAS_11; PAS domain
      pfam00010
      Location:91 → 143
      HLH; Helix-loop-helix DNA-binding domain
      pfam00989
      Location:163 → 269
      PAS; PAS fold

    7. XM_015151771.2 → XP_015007257.2  aryl hydrocarbon receptor nuclear translocator isoform X5

      UniProtKB/TrEMBL
      F7A359
      Conserved Domains (4) summary
      pfam14598
      Location:355 → 455
      PAS_11; PAS domain
      pfam00010
      Location:76 → 128
      HLH; Helix-loop-helix DNA-binding domain
      pfam00989
      Location:148 → 262
      PAS; PAS fold
      pfam03154
      Location:536 → 749
      Atrophin-1; Atrophin-1 family

    8. XM_028829272.1 → XP_028685105.1  aryl hydrocarbon receptor nuclear translocator isoform X8

      UniProtKB/TrEMBL
      F7A359
      Conserved Domains (4) summary
      pfam14598
      Location:361 → 461
      PAS_11; PAS domain
      pfam00010
      Location:90 → 142
      HLH; Helix-loop-helix DNA-binding domain
      pfam00989
      Location:162 → 268
      PAS; PAS fold
      pfam03154
      Location:542 → 755
      Atrophin-1; Atrophin-1 family
    Nucleotide Protein
    Heading Accession and Version

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