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    RPP40 ribonuclease P/MRP subunit p40 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710505, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RPP40provided by VGNC
    Official Full Name
    ribonuclease P/MRP subunit p40provided by VGNC
    Primary source
    VGNC:VGNC:77069
    See related
    Ensembl:ENSMMUG00000004966
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RPP40 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (165106427..165115077)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (5025520..5034185, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene dimethyladenosine transferase 2, mitochondrial-like Neighboring gene uncharacterized LOC106997781 Neighboring gene 40S ribosomal protein S18 pseudogene Neighboring gene chromodomain Y like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ribonuclease MRP activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribonuclease P activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tRNA 3'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tRNA 5'-leader removal IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of multimeric ribonuclease P complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonuclease MRP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribonuclease P protein subunit p40
    XP_001095772.2
    XP_028703690.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      165106427..165115077
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001095772.4 → XP_001095772.2  ribonuclease P protein subunit p40 isoform X1

      UniProtKB/TrEMBL
      F7C1Q7, H9FP07
      Related
      ENSMMUP00000006584.2, ENSMMUT00000007004.3
      Conserved Domains (1) summary
      pfam08584
      Location:75 → 343
      Ribonuc_P_40; Ribonuclease P 40kDa (Rpp40) subunit

    2. XM_028847857.1 → XP_028703690.1  ribonuclease P protein subunit p40 isoform X2

      UniProtKB/TrEMBL
      H9FP07
      Conserved Domains (1) summary
      pfam08584
      Location:75 → 301
      Ribonuc_P_40; Ribonuclease P 40kDa (Rpp40) subunit
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials