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    RPN2 ribophorin II [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708971, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RPN2provided by VGNC
    Official Full Name
    ribophorin IIprovided by VGNC
    Primary source
    VGNC:VGNC:76925
    See related
    Ensembl:ENSMMUG00000010363
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RPN2 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (72437595..72498051)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (26829757..26890401, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 Neighboring gene RB transcriptional corepressor like 1 Neighboring gene ubiquitin-40S ribosomal protein S27a pseudogene Neighboring gene maestro heat like repeat family member 8 Neighboring gene growth hormone releasing hormone Neighboring gene mannosidase beta like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein N-linked glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of oligosaccharyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2
    XP_015004531.1
    XP_015004532.1
    XP_028684240.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      72437595..72498051
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015149045.2 → XP_015004531.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1

      UniProtKB/TrEMBL
      F7CA11, F7CA28
      Related
      ENSMMUP00000037885.3, ENSMMUT00000044862.3
      Conserved Domains (1) summary
      pfam05817
      Location:9 → 623
      Ribophorin_II; Oligosaccharyltransferase subunit Ribophorin II

    2. XM_015149046.2 → XP_015004532.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X2

      UniProtKB/TrEMBL
      F7CA19
      Related
      ENSMMUP00000037884.3, ENSMMUT00000044861.3
      Conserved Domains (1) summary
      pfam05817
      Location:9 → 623
      Ribophorin_II; Oligosaccharyltransferase subunit Ribophorin II

    3. XM_028828407.1 → XP_028684240.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZT61, F7CA28
      Related
      ENSMMUP00000068347.1, ENSMMUT00000103921.1
      Conserved Domains (1) summary
      pfam05817
      Location:9 → 564
      Ribophorin_II; Oligosaccharyltransferase subunit Ribophorin II
    Nucleotide Protein
    Heading Accession and Version

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