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    SDCBP syndecan binding protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698381, updated on 17-Aug-2024

    Summary

    Official Symbol
    SDCBPprovided by VGNC
    Official Full Name
    syndecan binding proteinprovided by VGNC
    Primary source
    VGNC:VGNC:77000
    See related
    Ensembl:ENSMMUG00000017296
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
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    Genomic context

    See SDCBP in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (59204359..59235381)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (56562666..56593517)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 7 subfamily A member 1 Neighboring gene prothymosin alpha-like Neighboring gene neutral sphingomyelinase activation associated factor Neighboring gene uncharacterized LOC114680254 Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables syndecan binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    syntenin-1
    Names
    syndecan binding protein (syntenin)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257532.1NP_001244461.1  syntenin-1

      See identical proteins and their annotated locations for NP_001244461.1

      Status: PROVISIONAL

      Source sequence(s)
      JU320982
      UniProtKB/TrEMBL
      F7HUA1, G7MZE9, H9EQS9, I0FJ77
      Related
      ENSMMUP00000022754.4, ENSMMUT00000024311.4
      Conserved Domains (1) summary
      cd00992
      Location:112191
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      59204359..59235381
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015145394.2XP_015000880.1  syntenin-1 isoform X2

      UniProtKB/TrEMBL
      A0A5K1UI36, G7MZE9
      Related
      ENSMMUP00000059983.1, ENSMMUT00000060496.2
      Conserved Domains (1) summary
      cd00992
      Location:111190
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    2. XM_015145393.2XP_015000879.1  syntenin-1 isoform X1

      UniProtKB/TrEMBL
      F7HUA1, G7MZE9, H9EQS9, I0FJ77
      Conserved Domains (1) summary
      cd00992
      Location:112191
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    3. XM_015145395.2XP_015000881.1  syntenin-1 isoform X2

      UniProtKB/TrEMBL
      A0A5K1UI36, G7MZE9
      Conserved Domains (1) summary
      cd00992
      Location:111190
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...