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    ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698829, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ERCC3provided by VGNC
    Official Full Name
    ERCC excision repair 3, TFIIH core complex helicase subunitprovided by VGNC
    Primary source
    VGNC:VGNC:104526
    See related
    Ensembl:ENSMMUG00000064234
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ERCC3 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (3602873..3639943)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (3338194..3375077)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671496 Neighboring gene mitogen-activated protein kinase kinase kinase 2 Neighboring gene U6 spliceosomal RNA Neighboring gene WW domain-binding protein 11-like Neighboring gene cytochrome P450 family 27 subfamily C member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3'-5' DNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in embryonic organ development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in hair cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nucleotide-excision repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription initiation at RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nucleotide-excision repair factor 3 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription factor TFIIH holo complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription preinitiation complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    general transcription and DNA repair factor IIH helicase/translocase subunit XPB; general transcription and DNA repair factor IIH helicase subunit XPB
    Names
    TFIIH basal transcription factor complex helicase XPB subunit
    excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)
    NP_001253337.1
    XP_028686271.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266408.2 → NP_001253337.1  general transcription and DNA repair factor IIH helicase/translocase subunit XPB

      See identical proteins and their annotated locations for NP_001253337.1

      Status: PROVISIONAL

      Source sequence(s)
      JV046430
      UniProtKB/TrEMBL
      G7NB45, H9FR52
      Related
      ENSMMUP00000065807.1, ENSMMUT00000081107.1
      Conserved Domains (1) summary
      TIGR00603
      Location:60 → 779
      rad25; DNA repair helicase rad25

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      3602873..3639943
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028830438.1 → XP_028686271.1  general transcription and DNA repair factor IIH helicase subunit XPB isoform X1

      UniProtKB/TrEMBL
      G7NB45
      Conserved Domains (1) summary
      TIGR00603
      Location:60 → 650
      rad25; DNA repair helicase rad25
    Nucleotide Protein
    Heading Accession and Version

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