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    SBF2 SET binding factor 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706782, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SBF2provided by VGNC
    Official Full Name
    SET binding factor 2provided by VGNC
    Primary source
    VGNC:VGNC:77075
    See related
    Ensembl:ENSMMUG00000009205
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SBF2 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    42
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (55387760..55907518)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (56190837..56710208)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene U6atac minor spliceosomal RNA Neighboring gene adrenomedullin Neighboring gene glutamine synthetase pseudogene Neighboring gene U7 small nuclear RNA Neighboring gene uncharacterized LOC114672343 Neighboring gene uncharacterized LOC106993338 Neighboring gene switching B cell complex subunit SWAP70

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    myotubularin-related protein 13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      55387760..55907518
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028833693.1 → XP_028689526.1  myotubularin-related protein 13 isoform X1

      UniProtKB/TrEMBL
      A0A5K1V3F8
      Conserved Domains (7) summary
      smart00801
      Location:352 → 420
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:1 → 86
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1799 → 1904
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13339
      Location:882 → 1000
      PH-GRAM_MTMR13; Myotubularian (MTM) related 13 protein Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam02141
      Location:116 → 298
      DENN; DENN (AEX-3) domain
      pfam12335
      Location:531 → 754
      SBF2; Myotubularin protein
      cl28904
      Location:1138 → 1542
      PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

    2. XM_015114884.2 → XP_014970370.2  myotubularin-related protein 13 isoform X2

      UniProtKB/TrEMBL
      A0A5K1V3F8, F7HJS9, H9ESA7
      Related
      ENSMMUP00000012070.4, ENSMMUT00000012873.4
      Conserved Domains (7) summary
      smart00801
      Location:352 → 420
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:1 → 86
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1742 → 1847
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13339
      Location:882 → 1000
      PH-GRAM_MTMR13; Myotubularian (MTM) related 13 protein Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam02141
      Location:116 → 298
      DENN; DENN (AEX-3) domain
      pfam12335
      Location:531 → 754
      SBF2; Myotubularin protein
      cd14589
      Location:1138 → 1485
      PTP-MTMR13; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 13
    Nucleotide Protein
    Heading Accession and Version

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