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    FDPS farnesyl diphosphate synthase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717761, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FDPSprovided by VGNC
    Official Full Name
    farnesyl diphosphate synthaseprovided by VGNC
    Primary source
    VGNC:VGNC:106366
    See related
    Ensembl:ENSMMUG00000023144
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See FDPS in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (95692670..95705048, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (129998414..130010802)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene ASH1 like histone lysine methyltransferase Neighboring gene transcription factor BTF3 homolog 4 pseudogene Neighboring gene RUN and SH3 domain containing 1 Neighboring gene pyruvate kinase L/R Neighboring gene hyperpolarization activated cyclic nucleotide gated potassium channel 3 Neighboring gene CDC like kinase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dimethylallyltranstransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables geranyltranstransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in farnesyl diphosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    farnesyl pyrophosphate synthase
    Names
    farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      95692670..95705048 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015111521.1 → XP_014967007.1  farnesyl pyrophosphate synthase isoform X5

      UniProtKB/TrEMBL
      A0A1D5QBT1
      Conserved Domains (1) summary
      pfam00348
      Location:1 → 203
      polyprenyl_synt; Polyprenyl synthetase

    2. XM_015111501.1 → XP_014966987.1  farnesyl pyrophosphate synthase isoform X4

      UniProtKB/TrEMBL
      F7FI22, F7FI27, G7MDX3
      Conserved Domains (1) summary
      pfam00348
      Location:42 → 308
      polyprenyl_synt; Polyprenyl synthetase

    3. XM_015111495.1 → XP_014966981.1  farnesyl pyrophosphate synthase isoform X4

      UniProtKB/TrEMBL
      F7FI22, F7FI27, G7MDX3
      Related
      ENSMMUP00000030467.3, ENSMMUT00000032559.4
      Conserved Domains (1) summary
      pfam00348
      Location:42 → 308
      polyprenyl_synt; Polyprenyl synthetase

    4. XM_028828215.1 → XP_028684048.1  farnesyl pyrophosphate synthase isoform X3

      UniProtKB/TrEMBL
      G7MDX3
      Conserved Domains (1) summary
      pfam00348
      Location:42 → 311
      polyprenyl_synt; Polyprenyl synthetase

    5. XM_028828219.1 → XP_028684052.1  farnesyl pyrophosphate synthase isoform X3

      UniProtKB/TrEMBL
      G7MDX3
      Conserved Domains (1) summary
      pfam00348
      Location:42 → 311
      polyprenyl_synt; Polyprenyl synthetase

    6. XM_028828266.1 → XP_028684099.1  farnesyl pyrophosphate synthase isoform X5

      UniProtKB/TrEMBL
      A0A1D5QBT1
      Conserved Domains (1) summary
      pfam00348
      Location:1 → 203
      polyprenyl_synt; Polyprenyl synthetase

    7. XM_028828208.1 → XP_028684041.1  farnesyl pyrophosphate synthase isoform X1

      UniProtKB/TrEMBL
      G7MDX3
      Conserved Domains (1) summary
      pfam00348
      Location:108 → 377
      polyprenyl_synt; Polyprenyl synthetase

    8. XM_015111484.2 → XP_014966970.1  farnesyl pyrophosphate synthase isoform X2

      UniProtKB/TrEMBL
      G7MDX3, H9YVT1
      Related
      ENSMMUP00000079002.1, ENSMMUT00000082507.1
      Conserved Domains (1) summary
      pfam00348
      Location:108 → 374
      polyprenyl_synt; Polyprenyl synthetase

    9. XM_028828231.1 → XP_028684064.1  farnesyl pyrophosphate synthase isoform X3

      UniProtKB/TrEMBL
      G7MDX3
      Conserved Domains (1) summary
      pfam00348
      Location:42 → 311
      polyprenyl_synt; Polyprenyl synthetase

    10. XM_028828226.1 → XP_028684059.1  farnesyl pyrophosphate synthase isoform X3

      UniProtKB/TrEMBL
      G7MDX3
      Conserved Domains (1) summary
      pfam00348
      Location:42 → 311
      polyprenyl_synt; Polyprenyl synthetase

    11. XM_015111516.2 → XP_014967002.1  farnesyl pyrophosphate synthase isoform X4

      UniProtKB/TrEMBL
      F7FI22, F7FI27, G7MDX3
      Conserved Domains (1) summary
      pfam00348
      Location:42 → 308
      polyprenyl_synt; Polyprenyl synthetase

    12. XM_015111511.2 → XP_014966997.1  farnesyl pyrophosphate synthase isoform X4

      UniProtKB/TrEMBL
      F7FI22, F7FI27, G7MDX3
      Conserved Domains (1) summary
      pfam00348
      Location:42 → 308
      polyprenyl_synt; Polyprenyl synthetase
    Nucleotide Protein
    Heading Accession and Version

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