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    PTPRN protein tyrosine phosphatase receptor type N [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702826, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PTPRNprovided by VGNC
    Official Full Name
    protein tyrosine phosphatase receptor type Nprovided by VGNC
    Primary source
    VGNC:VGNC:76620
    See related
    Ensembl:ENSMMUG00000012008
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PTPRN in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (106728013..106747860, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (101421018..101440839, complement)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene tubulin alpha-8 chain pseudogene Neighboring gene uncharacterized LOC114671426 Neighboring gene DnaJ heat shock protein family (Hsp40) member B2 Neighboring gene microRNA mir-153-1 Neighboring gene regulated endocrine specific protein 18 Neighboring gene aspartyl aminopeptidase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in secretory granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    receptor-type tyrosine-protein phosphatase-like N
    XP_014966610.2
    XP_014966611.2
    XP_028686968.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      106728013..106747860 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015111125.2 → XP_014966611.2  receptor-type tyrosine-protein phosphatase-like N isoform X2

      UniProtKB/TrEMBL
      A0A5F7Z6Y0, G7N8Z8, H9EW26
      Related
      ENSMMUP00000061138.1, ENSMMUT00000099217.1
      Conserved Domains (4) summary
      PHA03247
      Location:131 → 468
      PHA03247; large tegument protein UL36; Provisional
      pfam14948
      Location:60 → 138
      RESP18; RESP18 domain
      pfam11548
      Location:469 → 557
      Receptor_IA-2; Protein-tyrosine phosphatase receptor IA-2
      cd14609
      Location:693 → 973
      R-PTP-N; PTP-like domain of receptor-type tyrosine-protein phosphatase N

    2. XM_028831135.1 → XP_028686968.1  receptor-type tyrosine-protein phosphatase-like N isoform X3

      UniProtKB/TrEMBL
      G7N8Z8, H9EW26
      Conserved Domains (4) summary
      PHA03247
      Location:131 → 469
      PHA03247; large tegument protein UL36; Provisional
      pfam14948
      Location:60 → 138
      RESP18; RESP18 domain
      pfam11548
      Location:470 → 558
      Receptor_IA-2; Protein-tyrosine phosphatase receptor IA-2
      cl28904
      Location:694 → 933
      PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

    3. XM_015111124.2 → XP_014966610.2  receptor-type tyrosine-protein phosphatase-like N isoform X1

      UniProtKB/TrEMBL
      G7N8Z8, H9EW26
      Conserved Domains (4) summary
      PHA03247
      Location:131 → 469
      PHA03247; large tegument protein UL36; Provisional
      pfam14948
      Location:60 → 138
      RESP18; RESP18 domain
      pfam11548
      Location:470 → 558
      Receptor_IA-2; Protein-tyrosine phosphatase receptor IA-2
      cd14609
      Location:694 → 974
      R-PTP-N; PTP-like domain of receptor-type tyrosine-protein phosphatase N
    Nucleotide Protein
    Heading Accession and Version

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