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    SNF8 SNF8 subunit of ESCRT-II [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700029, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SNF8provided by VGNC
    Official Full Name
    SNF8 subunit of ESCRT-IIprovided by VGNC
    Primary source
    VGNC:VGNC:77729
    See related
    Ensembl:ENSMMUG00000021087
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SNF8 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (47847039..47863998)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (40610916..40626323)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene U1 spliceosomal RNA Neighboring gene ubiquitin conjugating enzyme E2 Z Neighboring gene ATP synthase membrane subunit c locus 1 Neighboring gene small nucleolar RNA SNORA68

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ESCRT II complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vacuolar-sorting protein SNF8
    Names
    SNF8, ESCRT-II complex subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      47847039..47863998
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028836396.1 → XP_028692229.1  vacuolar-sorting protein SNF8 isoform X1

      UniProtKB/TrEMBL
      F7GY26, G7NHE1, H9FPF5
      Related
      ENSMMUP00000027758.4, ENSMMUT00000029659.4
      Conserved Domains (1) summary
      pfam04157
      Location:6 → 225
      EAP30; EAP30/Vps36 family

    2. XM_028836397.1 → XP_028692230.1  vacuolar-sorting protein SNF8 isoform X2

      UniProtKB/TrEMBL
      G7NHE1
      Conserved Domains (1) summary
      pfam04157
      Location:6 → 190
      EAP30; EAP30/Vps36 family

    3. XM_028836398.1 → XP_028692231.1  vacuolar-sorting protein SNF8 isoform X3

      Conserved Domains (1) summary
      pfam04157
      Location:13 → 121
      EAP30; EAP30/Vps36 family
    Nucleotide Protein
    Heading Accession and Version

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