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    ZIC4 Zic family member 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712982, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZIC4provided by VGNC
    Official Full Name
    Zic family member 4provided by VGNC
    Primary source
    VGNC:VGNC:79249
    See related
    Ensembl:ENSMMUG00000004741
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ZIC4 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (49518797..49539688, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (154350232..154373578)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene phospholipid scramblase family member 5 Neighboring gene uncharacterized LOC114676270 Neighboring gene coiled-coil domain-containing protein 25 pseudogene Neighboring gene uncharacterized LOC106997086 Neighboring gene Zic family member 1 Neighboring gene uncharacterized LOC114676132

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in central nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein ZIC 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      49518797..49539688 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015131975.2 → XP_014987461.2  zinc finger protein ZIC 4 isoform X2

      UniProtKB/TrEMBL
      F6WSL6, G7MJK1
      Related
      ENSMMUP00000038569.3, ENSMMUT00000045535.3
      Conserved Domains (2) summary
      COG5048
      Location:142 → 288
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:178 → 198
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_028843761.1 → XP_028699594.1  zinc finger protein ZIC 4 isoform X1

      UniProtKB/TrEMBL
      F6SUB0, G7MJK1
      Related
      ENSMMUP00000006303.4, ENSMMUT00000006699.4
      Conserved Domains (2) summary
      COG5048
      Location:192 → 338
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:228 → 248
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_028843762.1 → XP_028699595.1  zinc finger protein ZIC 4 isoform X3

      Conserved Domains (2) summary
      COG5048
      Location:241 → 286
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:194 → 212
      ZF_C2H2; C2H2 Zn finger [structural motif]

    RNA

    1. XR_003727146.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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