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    SSH1 slingshot protein phosphatase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707809, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SSH1provided by VGNC
    Official Full Name
    slingshot protein phosphatase 1provided by VGNC
    Primary source
    VGNC:VGNC:78017
    See related
    Ensembl:ENSMMUG00000015107
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SSH1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (108411929..108487935, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (108695641..108772837, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107001009 Neighboring gene U7 small nuclear RNA Neighboring gene coronin 1C Neighboring gene uncharacterized LOC107001010 Neighboring gene U6 spliceosomal RNA Neighboring gene D-amino acid oxidase Neighboring gene SV2 related protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine/serine/threonine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein phosphatase Slingshot homolog 1
    Names
    slingshot homolog 1
    XP_001096246.4
    XP_015008203.2
    XP_015008204.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      108411929..108487935 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015152717.2 → XP_015008203.2  protein phosphatase Slingshot homolog 1 isoform X2

      UniProtKB/TrEMBL
      F6WNH3, H9ZAA7
      Related
      ENSMMUP00000019799.4, ENSMMUT00000021173.4
      Conserved Domains (3) summary
      cd11652
      Location:3 → 237
      SSH-N; N-terminal domain conserved in slingshot (SSH) phosphatases
      pfam08766
      Location:251 → 303
      DEK_C; DEK C terminal domain
      cd14570
      Location:306 → 449
      DSP_slingshot_1; dual specificity phosphatase domain of slingshot homolog 1

    2. XM_015152718.2 → XP_015008204.2  protein phosphatase Slingshot homolog 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZSX4, H9ZAA7
      Related
      ENSMMUP00000068251.1, ENSMMUT00000080575.1
      Conserved Domains (3) summary
      cd11652
      Location:1 → 157
      SSH-N; N-terminal domain conserved in slingshot (SSH) phosphatases
      pfam08766
      Location:171 → 223
      DEK_C; DEK C terminal domain
      cd14570
      Location:226 → 369
      DSP_slingshot_1; dual specificity phosphatase domain of slingshot homolog 1

    3. XM_001096246.4 → XP_001096246.4  protein phosphatase Slingshot homolog 1 isoform X1

      UniProtKB/TrEMBL
      H9ZAA7
      Related
      ENSMMUP00000019800.4, ENSMMUT00000021174.4
      Conserved Domains (3) summary
      cd11652
      Location:102 → 309
      SSH-N; N-terminal domain conserved in slingshot (SSH) phosphatases
      pfam08766
      Location:323 → 375
      DEK_C; DEK C terminal domain
      cd14570
      Location:378 → 521
      DSP_slingshot_1; dual specificity phosphatase domain of slingshot homolog 1
    Nucleotide Protein
    Heading Accession and Version

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