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    ZC3H13 zinc finger CCCH-type containing 13 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703196, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZC3H13provided by VGNC
    Official Full Name
    zinc finger CCCH-type containing 13provided by VGNC
    Primary source
    VGNC:VGNC:79248
    See related
    Ensembl:ENSMMUG00000017025
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ZC3H13 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (24454872..24553043, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (25133005..25230820, complement)

    Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene chibby family member 2 Neighboring gene siah E3 ubiquitin protein ligase family member 3 Neighboring gene uncharacterized LOC114673524 Neighboring gene uncharacterized LOC106994255 Neighboring gene carboxypeptidase B2 Neighboring gene lymphocyte cytosolic protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nuclear speck IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger CCCH domain-containing protein 13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041770.1 Reference Mmul_10 Primary Assembly

      Range
      24454872..24553043 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015121034.2 → XP_014976520.2  zinc finger CCCH domain-containing protein 13 isoform X4

      UniProtKB/TrEMBL
      A0A1D5Q486, G7NK33
      Conserved Domains (2) summary
      PRK12678
      Location:343 → 566
      PRK12678; transcription termination factor Rho; Provisional
      pfam00642
      Location:42 → 63
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

    2. XM_015121027.2 → XP_014976513.2  zinc finger CCCH domain-containing protein 13 isoform X1

      UniProtKB/TrEMBL
      F7HQZ5, G7NK33
      Conserved Domains (2) summary
      PRK12678
      Location:343 → 566
      PRK12678; transcription termination factor Rho; Provisional
      pfam00642
      Location:42 → 63
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

    3. XM_015121030.2 → XP_014976516.2  zinc finger CCCH domain-containing protein 13 isoform X1

      UniProtKB/TrEMBL
      F7HQZ5, G7NK33
      Conserved Domains (2) summary
      PRK12678
      Location:343 → 566
      PRK12678; transcription termination factor Rho; Provisional
      pfam00642
      Location:42 → 63
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

    4. XM_028837477.1 → XP_028693310.1  zinc finger CCCH domain-containing protein 13 isoform X4

      UniProtKB/TrEMBL
      A0A1D5Q486, G7NK33
      Related
      ENSMMUP00000042849.2, ENSMMUT00000056727.2
      Conserved Domains (2) summary
      PRK12678
      Location:343 → 566
      PRK12678; transcription termination factor Rho; Provisional
      pfam00642
      Location:42 → 63
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

    5. XM_015121036.2 → XP_014976522.2  zinc finger CCCH domain-containing protein 13 isoform X5

      UniProtKB/TrEMBL
      G7NK33
      Conserved Domains (2) summary
      PRK12678
      Location:343 → 566
      PRK12678; transcription termination factor Rho; Provisional
      pfam00642
      Location:42 → 63
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

    6. XM_015121033.2 → XP_014976519.2  zinc finger CCCH domain-containing protein 13 isoform X4

      UniProtKB/TrEMBL
      A0A1D5Q486, G7NK33
      Conserved Domains (2) summary
      PRK12678
      Location:343 → 566
      PRK12678; transcription termination factor Rho; Provisional
      pfam00642
      Location:42 → 63
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

    7. XM_028837476.1 → XP_028693309.1  zinc finger CCCH domain-containing protein 13 isoform X3

      UniProtKB/TrEMBL
      G7NK33
      Conserved Domains (2) summary
      PRK12678
      Location:343 → 566
      PRK12678; transcription termination factor Rho; Provisional
      pfam00642
      Location:42 → 63
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

    8. XM_015121031.2 → XP_014976517.2  zinc finger CCCH domain-containing protein 13 isoform X2

      UniProtKB/TrEMBL
      G7NK33
      Conserved Domains (2) summary
      PRK12678
      Location:343 → 566
      PRK12678; transcription termination factor Rho; Provisional
      pfam00642
      Location:42 → 63
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

    9. XM_015121025.2 → XP_014976511.2  zinc finger CCCH domain-containing protein 13 isoform X1

      UniProtKB/TrEMBL
      F7HQZ5, G7NK33
      Conserved Domains (2) summary
      PRK12678
      Location:343 → 566
      PRK12678; transcription termination factor Rho; Provisional
      pfam00642
      Location:42 → 63
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

    10. XM_015121026.2 → XP_014976512.2  zinc finger CCCH domain-containing protein 13 isoform X1

      UniProtKB/TrEMBL
      F7HQZ5, G7NK33
      Conserved Domains (2) summary
      PRK12678
      Location:343 → 566
      PRK12678; transcription termination factor Rho; Provisional
      pfam00642
      Location:42 → 63
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

    11. XM_015121035.2 → XP_014976521.2  zinc finger CCCH domain-containing protein 13 isoform X4

      UniProtKB/TrEMBL
      A0A1D5Q486, G7NK33
      Conserved Domains (2) summary
      PRK12678
      Location:343 → 566
      PRK12678; transcription termination factor Rho; Provisional
      pfam00642
      Location:42 → 63
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

    12. XM_015121038.2 → XP_014976524.2  zinc finger CCCH domain-containing protein 13 isoform X6

      UniProtKB/TrEMBL
      G7NK33
      Conserved Domains (1) summary
      PRK12678
      Location:176 → 399
      PRK12678; transcription termination factor Rho; Provisional

    13. XM_015121028.2 → XP_014976514.2  zinc finger CCCH domain-containing protein 13 isoform X1

      UniProtKB/TrEMBL
      F7HQZ5, G7NK33
      Conserved Domains (2) summary
      PRK12678
      Location:343 → 566
      PRK12678; transcription termination factor Rho; Provisional
      pfam00642
      Location:42 → 63
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

    14. XM_015121029.2 → XP_014976515.2  zinc finger CCCH domain-containing protein 13 isoform X1

      UniProtKB/TrEMBL
      F7HQZ5, G7NK33
      Related
      ENSMMUP00000022404.4, ENSMMUT00000023934.4
      Conserved Domains (2) summary
      PRK12678
      Location:343 → 566
      PRK12678; transcription termination factor Rho; Provisional
      pfam00642
      Location:42 → 63
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    Nucleotide Protein
    Heading Accession and Version

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