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    LOC716974 zinc finger protein 440 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716974, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC716974
    Gene description
    zinc finger protein 440
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    ZNF440
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    Genomic context

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    See LOC716974 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (11573883..11600308)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (11873361..11885871)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 441 Neighboring gene mitochondrial import inner membrane translocase subunit Tim8 B Neighboring gene zinc finger protein 844-like Neighboring gene zinc finger protein 69 Neighboring gene zinc finger protein 709-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 28 homolog; zinc finger protein 440; zinc finger protein 442

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      11573883..11600308
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028839162.1 → XP_028694995.1  zinc finger protein 442 isoform X3

      Conserved Domains (3) summary
      sd00017
      Location:210 → 230
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:236 → 258
      zf-C2H2; Zinc finger, C2H2 type
      pfam01352
      Location:129 → 167
      KRAB; KRAB box

    2. XM_015122978.2 → XP_014978464.2  zinc finger protein 28 homolog isoform X4

      Conserved Domains (1) summary
      pfam01352
      Location:129 → 167
      KRAB; KRAB box

    3. XM_015122977.2 → XP_014978463.1  zinc finger protein 442 isoform X2

      Conserved Domains (4) summary
      smart00349
      Location:129 → 169
      KRAB; krueppel associated box
      sd00017
      Location:214 → 230
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:236 → 258
      zf-C2H2; Zinc finger, C2H2 type
      pfam01352
      Location:129 → 166
      KRAB; KRAB box

    4. XM_015122975.2 → XP_014978461.2  zinc finger protein 440 isoform X1

      Conserved Domains (3) summary
      COG5048
      Location:221 → 537
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:392 → 412
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:25 → 66
      KRAB; KRAB box

    RNA

    1. XR_003724968.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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