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    RC3H1 ring finger and CCCH-type domains 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707745, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RC3H1provided by VGNC
    Official Full Name
    ring finger and CCCH-type domains 1provided by VGNC
    Primary source
    VGNC:VGNC:76861
    See related
    Ensembl:ENSMMUG00000000630
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    roquin
    Orthologs
    human mouse all
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    Genomic context

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    See RC3H1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (31232805..31324450, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (193540035..193632721)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106994756 Neighboring gene zinc finger and BTB domain containing 37 Neighboring gene serpin family C member 1 Neighboring gene 5S ribosomal RNA Neighboring gene putative 60S ribosomal protein L37a Neighboring gene U7 small nuclear RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    roquin; roquin-1
    Names
    ring finger and CCCH-type zinc finger domains 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      31232805..31324450 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028850563.1 → XP_028706396.1  roquin-1 isoform X4

      UniProtKB/TrEMBL
      A0A1D5Q433
      Related
      ENSMMUP00000042796.2, ENSMMUT00000060679.2
      Conserved Domains (4) summary
      PRK10263
      Location:494 → 727
      PRK10263; DNA translocase FtsK; Provisional
      cd16638
      Location:11 → 54
      mRING-HC-C3HC3D_Roquin; Modified RING finger, HC subclass (C3HC3D-type), found in Roquin-1, Roquin-2, and similar proteins
      pfam00642
      Location:414 → 440
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      pfam18386
      Location:271 → 326
      ROQ_II; Roquin II domain

    2. XM_028850562.1 → XP_028706395.1  roquin-1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5Q433
      Conserved Domains (4) summary
      PRK10263
      Location:494 → 727
      PRK10263; DNA translocase FtsK; Provisional
      cd16638
      Location:11 → 54
      mRING-HC-C3HC3D_Roquin; Modified RING finger, HC subclass (C3HC3D-type), found in Roquin-1, Roquin-2, and similar proteins
      pfam00642
      Location:414 → 440
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      pfam18386
      Location:271 → 326
      ROQ_II; Roquin II domain

    3. XM_028850561.1 → XP_028706394.1  roquin-1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q433, A0A5S6RAE3, A0A8J8YMK6, F6Y0L7, G7MFD8
      Related
      ENSMMUP00000000844.3, ENSMMUT00000000906.4
      Conserved Domains (4) summary
      PRK10263
      Location:494 → 727
      PRK10263; DNA translocase FtsK; Provisional
      cd16638
      Location:11 → 54
      mRING-HC-C3HC3D_Roquin; Modified RING finger, HC subclass (C3HC3D-type), found in Roquin-1, Roquin-2, and similar proteins
      pfam00642
      Location:414 → 440
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      pfam18386
      Location:271 → 326
      ROQ_II; Roquin II domain

    4. XM_028850560.1 → XP_028706393.1  roquin-1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q433
      Conserved Domains (4) summary
      PRK10263
      Location:494 → 727
      PRK10263; DNA translocase FtsK; Provisional
      pfam00642
      Location:414 → 440
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      pfam18386
      Location:271 → 326
      ROQ_II; Roquin II domain
      cd16781
      Location:6 → 54
      mRING-HC-C3HC3D_Roquin1; Modified RING finger, HC subclass (C3HC3D-type), found in Roquin-1
    Nucleotide Protein
    Heading Accession and Version

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