U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    C1QTNF1 C1q and TNF related 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711093, updated on 17-Aug-2024

    Summary

    Official Symbol
    C1QTNF1provided by VGNC
    Official Full Name
    C1q and TNF related 1provided by VGNC
    Primary source
    VGNC:VGNC:70311
    See related
    Ensembl:ENSMMUG00000009504
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See C1QTNF1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (75334918..75372228)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (72828068..72865177)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene galectin 3 binding protein Neighboring gene calcium activated nucleotidase 1 Neighboring gene endo-beta-N-acetylglucosaminidase Neighboring gene RNA binding fox-1 homolog 3 Neighboring gene uncharacterized LOC114673198

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    complement C1q tumor necrosis factor-related protein 1
    Names
    C1q and tumor necrosis factor related protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266074.1NP_001253003.1  complement C1q tumor necrosis factor-related protein 1 precursor

      See identical proteins and their annotated locations for NP_001253003.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045734
      UniProtKB/TrEMBL
      F6YMZ3, G7NH11
      Conserved Domains (2) summary
      pfam01391
      Location:99140
      Collagen; Collagen triple helix repeat (20 copies)
      pfam00386
      Location:147275
      C1q; C1q domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      75334918..75372228
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015120356.2XP_014975842.2  complement C1q tumor necrosis factor-related protein 1 isoform X3

      UniProtKB/TrEMBL
      F6YN01, G7NH11
      Conserved Domains (2) summary
      pfam00386
      Location:148276
      C1q; C1q domain
      pfam01391
      Location:99141
      Collagen; Collagen triple helix repeat (20 copies)
    2. XM_015120353.2XP_014975839.2  complement C1q tumor necrosis factor-related protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8ARH4
      Related
      ENSMMUP00000080447.1, ENSMMUT00000083473.1
      Conserved Domains (2) summary
      pfam01391
      Location:199240
      Collagen; Collagen triple helix repeat (20 copies)
      pfam00386
      Location:247375
      C1q; C1q domain
    3. XM_015120355.2XP_014975841.2  complement C1q tumor necrosis factor-related protein 1 isoform X3

      UniProtKB/TrEMBL
      F6YN01, G7NH11
      Related
      ENSMMUP00000072295.1, ENSMMUT00000085839.1
      Conserved Domains (2) summary
      pfam00386
      Location:148276
      C1q; C1q domain
      pfam01391
      Location:99141
      Collagen; Collagen triple helix repeat (20 copies)
    4. XM_015120354.2XP_014975840.2  complement C1q tumor necrosis factor-related protein 1 isoform X2

      UniProtKB/TrEMBL
      G7NH11
      Conserved Domains (2) summary
      pfam00386
      Location:173301
      C1q; C1q domain
      pfam01391
      Location:124166
      Collagen; Collagen triple helix repeat (20 copies)
    5. XM_028835576.1XP_028691409.1  complement C1q tumor necrosis factor-related protein 1 isoform X3

      UniProtKB/TrEMBL
      F6YN01, G7NH11
      Related
      ENSMMUP00000012431.4, ENSMMUT00000013263.4
      Conserved Domains (2) summary
      pfam00386
      Location:148276
      C1q; C1q domain
      pfam01391
      Location:99141
      Collagen; Collagen triple helix repeat (20 copies)