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    TPGS2 tubulin polyglutamylase complex subunit 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709953, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TPGS2provided by VGNC
    Official Full Name
    tubulin polyglutamylase complex subunit 2provided by VGNC
    Primary source
    VGNC:VGNC:79442
    Locus tag
    EGK_09642
    See related
    Ensembl:ENSMMUG00000006863
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C18orf10
    Orthologs
    human mouse all
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    Genomic context

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    See TPGS2 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 18 NC_041771.1 (45726560..45775006)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 18 NC_027910.1 (25438331..25487418, complement)

    Chromosome 18 - NC_041771.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114673828 Neighboring gene CUGBP Elav-like family member 4 Neighboring gene uncharacterized LOC114673827 Neighboring gene KIAA1328 Neighboring gene formin homology 2 domain containing 3 Neighboring gene WD repeat domain phosphoinositide-interacting protein 3 pseudogene Neighboring gene U4 spliceosomal RNA Neighboring gene molybdenum cofactor sulfurase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein polyglutamylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tubulin polyglutamylase complex subunit 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260587.2 → NP_001247516.1  tubulin polyglutamylase complex subunit 2

      See identical proteins and their annotated locations for NP_001247516.1

      Status: PROVISIONAL

      Source sequence(s)
      JV046690
      UniProtKB/TrEMBL
      A0A1D5QCK8, F7F8U3
      Related
      ENSMMUP00000045777.2, ENSMMUT00000066831.2
      Conserved Domains (1) summary
      smart00860
      Location:44 → 192
      SMI1_KNR4; SMI1 / KNR4 family

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041771.1 Reference Mmul_10 Primary Assembly

      Range
      45726560..45775006
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015121733.2 → XP_014977219.1  tubulin polyglutamylase complex subunit 2 isoform X4

      UniProtKB/TrEMBL
      F7CFM5
      Related
      ENSMMUP00000041265.3, ENSMMUT00000048226.3
      Conserved Domains (1) summary
      smart00860
      Location:44 → 192
      SMI1_KNR4; SMI1 / KNR4 family

    2. XM_015121734.2 → XP_014977220.1  tubulin polyglutamylase complex subunit 2 isoform X5

      Conserved Domains (1) summary
      smart00860
      Location:44 → 192
      SMI1_KNR4; SMI1 / KNR4 family

    3. XM_015121731.2 → XP_014977217.1  tubulin polyglutamylase complex subunit 2 isoform X3

      Conserved Domains (1) summary
      smart00860
      Location:2 → 132
      SMI1_KNR4; SMI1 / KNR4 family

    4. XM_015121730.2 → XP_014977216.1  tubulin polyglutamylase complex subunit 2 isoform X2

      UniProtKB/TrEMBL
      F7F8U3
      Conserved Domains (1) summary
      smart00860
      Location:2 → 144
      SMI1_KNR4; SMI1 / KNR4 family

    5. XM_015121735.2 → XP_014977221.1  tubulin polyglutamylase complex subunit 2 isoform X6

      UniProtKB/TrEMBL
      A0A5S6R8A8, A0A8J8XHL9, F7F8U8, G7NKM1
      Related
      ENSMMUP00000009018.3, ENSMMUT00000009597.3
      Conserved Domains (1) summary
      smart00860
      Location:44 → 192
      SMI1_KNR4; SMI1 / KNR4 family

    6. XM_015121729.2 → XP_014977215.1  tubulin polyglutamylase complex subunit 2 isoform X1

      UniProtKB/TrEMBL
      F7F8U3
      Conserved Domains (1) summary
      smart00860
      Location:44 → 149
      SMI1_KNR4; SMI1 / KNR4 family
    Nucleotide Protein
    Heading Accession and Version

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