U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TMC6 transmembrane channel like 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714977, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TMC6provided by VGNC
    Official Full Name
    transmembrane channel like 6provided by VGNC
    Primary source
    VGNC:VGNC:79109
    See related
    Ensembl:ENSMMUG00000011932
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TMC6 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (74481622..74497820, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (71929498..71946555, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene trinucleotide repeat containing adaptor 6C Neighboring gene uncharacterized LOC114673194 Neighboring gene U6 spliceosomal RNA Neighboring gene transmembrane channel like 8 Neighboring gene uncharacterized LOC114673195 Neighboring gene chromosome 16 C17orf99 homolog

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mechanosensitive monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    transmembrane channel-like protein 6

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      74481622..74497820 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028836856.1 → XP_028692689.1  transmembrane channel-like protein 6 isoform X1

      UniProtKB/TrEMBL
      F6V4N8, F7HKR0, G7NGZ6
      Related
      ENSMMUP00000033993.3, ENSMMUT00000040964.3
      Conserved Domains (1) summary
      pfam07810
      Location:541 → 647
      TMC; TMC domain

    2. XM_028836857.1 → XP_028692690.1  transmembrane channel-like protein 6 isoform X2

      UniProtKB/TrEMBL
      G7NGZ6
      Conserved Domains (1) summary
      pfam07810
      Location:540 → 646
      TMC; TMC domain

    3. XM_028836855.1 → XP_028692688.1  transmembrane channel-like protein 6 isoform X1

      UniProtKB/TrEMBL
      F6V4N8, F7HKR0, G7NGZ6
      Related
      ENSMMUP00000015650.4, ENSMMUT00000016713.4
      Conserved Domains (1) summary
      pfam07810
      Location:541 → 647
      TMC; TMC domain

    4. XM_028836858.1 → XP_028692691.1  transmembrane channel-like protein 6 isoform X3

      UniProtKB/TrEMBL
      A0A5F8ABB9
      Related
      ENSMMUP00000075170.1, ENSMMUT00000085854.1
      Conserved Domains (1) summary
      pfam07810
      Location:541 → 647
      TMC; TMC domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.