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    RNF170 ring finger protein 170 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712606, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RNF170provided by VGNC
    Official Full Name
    ring finger protein 170provided by VGNC
    Primary source
    VGNC:VGNC:76818
    Locus tag
    EGK_18899
    See related
    Ensembl:ENSMMUG00000028999
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RNF170 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (43469148..43515170, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (41776359..41822410)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene cholinergic receptor nicotinic alpha 6 subunit Neighboring gene THAP domain containing 1 Neighboring gene hook microtubule tethering protein 3 Neighboring gene uncharacterized LOC114680240 Neighboring gene U1 spliceosomal RNA Neighboring gene farnesyltransferase, CAAX box, subunit alpha

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RNF170
    Names
    Putative LAG1-interacting protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      43469148..43515170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015145267.2 → XP_015000753.1  E3 ubiquitin-protein ligase RNF170 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AQV3, A0A5K1UG12, A0A8J8Y552, F6SN32, F7GTH7, G7MZ83
      Related
      ENSMMUP00000079447.1, ENSMMUT00000087045.1
      Conserved Domains (2) summary
      cd16553
      Location:87 → 130
      RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins
      pfam06803
      Location:203 → 239
      DUF1232; Protein of unknown function (DUF1232)

    2. XM_028852640.1 → XP_028708473.1  E3 ubiquitin-protein ligase RNF170 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AQV3, A0A5K1UG12, A0A8J8Y552, F6SN32, F7GTH7, G7MZ83
      Conserved Domains (2) summary
      cd16553
      Location:87 → 130
      RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins
      pfam06803
      Location:203 → 239
      DUF1232; Protein of unknown function (DUF1232)

    3. XM_028852641.1 → XP_028708474.1  E3 ubiquitin-protein ligase RNF170 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AQV3, A0A5K1UG12, A0A8J8Y552, F6SN32, F7GTH7, G7MZ83
      Related
      ENSMMUP00000026119.4, ENSMMUT00000027917.4
      Conserved Domains (2) summary
      cd16553
      Location:87 → 130
      RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins
      pfam06803
      Location:203 → 239
      DUF1232; Protein of unknown function (DUF1232)

    4. XM_015145270.2 → XP_015000756.1  E3 ubiquitin-protein ligase RNF170 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AQV3, A0A5K1UG12, A0A8J8Y552, F6SN32, F7GTH7, G7MZ83
      Related
      ENSMMUP00000032121.3, ENSMMUT00000039039.3
      Conserved Domains (2) summary
      cd16553
      Location:87 → 130
      RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins
      pfam06803
      Location:203 → 239
      DUF1232; Protein of unknown function (DUF1232)

    5. XM_015145269.2 → XP_015000755.1  E3 ubiquitin-protein ligase RNF170 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AQV3, A0A5K1UG12, A0A8J8Y552, F6SN32, F7GTH7, G7MZ83
      Conserved Domains (2) summary
      cd16553
      Location:87 → 130
      RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins
      pfam06803
      Location:203 → 239
      DUF1232; Protein of unknown function (DUF1232)

    6. XM_015145272.2 → XP_015000758.1  E3 ubiquitin-protein ligase RNF170 isoform X2

      Conserved Domains (2) summary
      cd16553
      Location:3 → 46
      RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins
      pfam06803
      Location:119 → 155
      DUF1232; Protein of unknown function (DUF1232)

    7. XM_028852642.1 → XP_028708475.1  E3 ubiquitin-protein ligase RNF170 isoform X2

      Conserved Domains (2) summary
      cd16553
      Location:3 → 46
      RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins
      pfam06803
      Location:119 → 155
      DUF1232; Protein of unknown function (DUF1232)
    Nucleotide Protein
    Heading Accession and Version

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