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    PSIP1 PC4 and SFRS1 interacting protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 664733, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PSIP1provided by VGNC
    Official Full Name
    PC4 and SFRS1 interacting protein 1provided by VGNC
    Primary source
    VGNC:VGNC:76437
    See related
    Ensembl:ENSMMUG00000002224
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    LEDGF
    Orthologs
    human mouse all
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    Genomic context

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    See PSIP1 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (68051455..68102238)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (68419733..68470043)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene thymosin beta-10 Neighboring gene U6 spliceosomal RNA Neighboring gene small nuclear RNA activating complex polypeptide 3 Neighboring gene tetratricopeptide repeat domain 39B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables double-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: PC4 and SFRS1-interacting protein
    Names
    PC4 and SFRS1-interacting protein
    lens epithelium-derived growth factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      68051455..68102238
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015117652.2 → XP_014973138.1  LOW QUALITY PROTEIN: PC4 and SFRS1-interacting protein

      UniProtKB/TrEMBL
      A0A1D5R4P6, H9ETF8
      Related
      ENSMMUP00000055282.2, ENSMMUT00000073719.2
      Conserved Domains (3) summary
      cd05834
      Location:3 → 87
      HDGF_related; The PWWP domain is an essential part of the Hepatoma Derived Growth Factor (HDGF) family of proteins, and is necessary for DNA binding by HDGF. This family of endogenous nuclear-targeted mitogens includes HRP (HDGF-related proteins 1, 2, 3, 4, or HPR1, ...
      pfam11467
      Location:349 → 450
      LEDGF; Lens epithelium-derived growth factor (LEDGF)
      cl27146
      Location:89 → 275
      Sigma70_r3; Sigma-70 region 3
    Nucleotide Protein
    Heading Accession and Version

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