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    PCGF1 polycomb group ring finger 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715341, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PCGF1provided by VGNC
    Official Full Name
    polycomb group ring finger 1provided by VGNC
    Primary source
    VGNC:VGNC:75640
    Locus tag
    EGK_05474
    See related
    Ensembl:ENSMMUG00000002127
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PCGF1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (34308619..34310995)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (75524225..75527438, complement)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene DEAQ-box RNA dependent ATPase 1 Neighboring gene T cell leukemia homeobox 2 Neighboring gene ladybird homeobox 2 Neighboring gene tetratricopeptide repeat domain 31 Neighboring gene mitochondrial ribosomal protein L53

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables promoter-specific chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of PRC1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polycomb group RING finger protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      34308619..34310995
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112696.2 → XP_014968182.1  polycomb group RING finger protein 1

      UniProtKB/TrEMBL
      A0A663D666, A0A8J8YKF0, F6UPP7, G7NAE8
      Related
      ENSMMUP00000002830.3, ENSMMUT00000002998.4
      Conserved Domains (2) summary
      cd16733
      Location:44 → 86
      RING-HC_PCGF1; RING finger, HC subclass, found in polycomb group RING finger protein 1 (PCGF1) and similar proteins
      cd17081
      Location:166 → 253
      RAWUL_PCGF1; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in polycomb group RING finger protein 1 (PCGF1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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