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    ERLEC1 endoplasmic reticulum lectin 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716460, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ERLEC1provided by VGNC
    Official Full Name
    endoplasmic reticulum lectin 1provided by VGNC
    Primary source
    VGNC:VGNC:72346
    Locus tag
    EGK_05323
    See related
    Ensembl:ENSMMUG00000010640
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ERLEC1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (54857391..54892247, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (54680651..54714837)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 75 Neighboring gene small nucleolar RNA U13 Neighboring gene ankyrin repeat and SOCS box containing 3 Neighboring gene syncytin-1-like Neighboring gene ChaC glutathione specific gamma-glutamylcyclotransferase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum unfolded protein response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retrograde protein transport, ER to cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum lumen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    endoplasmic reticulum lectin 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194631.3 → NP_001181560.1  endoplasmic reticulum lectin 1 precursor

      See identical proteins and their annotated locations for NP_001181560.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000094
      UniProtKB/TrEMBL
      A0A8J8YPJ7, F6ZY27, F6ZY36, G7NA22
      Related
      ENSMMUP00000036553.2, ENSMMUT00000043550.3
      Conserved Domains (2) summary
      pfam07915
      Location:342 → 421
      PRKCSH; Glucosidase II beta subunit-like protein
      cl06793
      Location:206 → 250
      PRKCSH; Glucosidase II beta subunit-like protein

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      54857391..54892247 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028831627.1 → XP_028687460.1  endoplasmic reticulum lectin 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZB68
      Conserved Domains (2) summary
      pfam07915
      Location:301 → 378
      PRKCSH; Glucosidase II beta subunit-like protein
      cl06793
      Location:163 → 207
      PRKCSH; Glucosidase II beta subunit-like protein

    2. XM_001114253.4 → XP_001114253.1  endoplasmic reticulum lectin 1 isoform X2

      See identical proteins and their annotated locations for XP_001114253.1

      UniProtKB/TrEMBL
      A0A5F7ZZC3, F6ZY36
      Related
      ENSMMUP00000070486.1, ENSMMUT00000079612.1
      Conserved Domains (2) summary
      pfam07915
      Location:111 → 199
      PRKCSH; Glucosidase II beta subunit-like protein
      cl06793
      Location:206 → 250
      PRKCSH; Glucosidase II beta subunit-like protein

    3. XM_028831626.1 → XP_028687459.1  endoplasmic reticulum lectin 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7Z9J0, A0A5F7ZB68
      Related
      ENSMMUP00000061837.1, ENSMMUT00000087782.1
      Conserved Domains (2) summary
      pfam07915
      Location:369 → 446
      PRKCSH; Glucosidase II beta subunit-like protein
      cl06793
      Location:231 → 275
      PRKCSH; Glucosidase II beta subunit-like protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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