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    YIF1A Yip1 interacting factor homolog A, membrane trafficking protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714486, updated on 17-Aug-2024

    Summary

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    Official Symbol
    YIF1Aprovided by VGNC
    Official Full Name
    Yip1 interacting factor homolog A, membrane trafficking proteinprovided by VGNC
    Primary source
    VGNC:VGNC:79044
    See related
    Ensembl:ENSMMUG00000001403
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See YIF1A in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (8259694..8264335)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (8133578..8138181)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene CD248 molecule Neighboring gene transmembrane protein 151A Neighboring gene cornichon family AMPA receptor auxiliary protein 2 Neighboring gene uncharacterized LOC114672228 Neighboring gene RAB1B, member RAS oncogene family

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in COPII-coated ER to Golgi transport vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum-Golgi intermediate compartment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein YIF1A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194498.1 → NP_001181427.1  protein YIF1A

      See identical proteins and their annotated locations for NP_001181427.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000104
      UniProtKB/TrEMBL
      A0A1D5QD33, F7CUN8, G7NC66
      Related
      ENSMMUP00000001875.4, ENSMMUT00000001989.4
      Conserved Domains (1) summary
      pfam03878
      Location:57 → 287
      YIF1; YIF1

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      8259694..8264335
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015113542.2 → XP_014969028.1  protein YIF1A isoform X1

      UniProtKB/TrEMBL
      G7NC66
      Conserved Domains (1) summary
      pfam03878
      Location:62 → 246
      YIF1; YIF1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials